Magnesium in PDB 7p3n: F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)

Enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)

All present enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2):
7.1.2.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2) (pdb code 7p3n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2), PDB code: 7p3n:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 7p3n

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Magnesium binding site 1 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:94.0
occ:1.00
O2B A:ATP601 1.8 100.5 1.0
O2G A:ATP601 2.3 100.5 1.0
PB A:ATP601 3.0 100.5 1.0
OG1 A:THR177 3.2 186.1 1.0
PG A:ATP601 3.3 100.5 1.0
O3B A:ATP601 3.3 100.5 1.0
O3A A:ATP601 3.8 100.5 1.0
CB A:THR177 4.0 186.1 1.0
O3G A:ATP601 4.1 100.5 1.0
O1B A:ATP601 4.2 100.5 1.0
CE A:LYS176 4.4 193.9 1.0
N A:THR177 4.4 186.1 1.0
O1G A:ATP601 4.6 100.5 1.0
NZ A:LYS176 4.8 193.9 1.0
CB A:LYS176 4.8 193.9 1.0
OE2 A:GLU332 4.8 253.8 1.0
CA A:THR177 4.8 186.1 1.0

Magnesium binding site 2 out of 4 in 7p3n

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Magnesium binding site 2 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:75.8
occ:1.00
O2G B:ATP601 2.2 79.8 0.8
O2B B:ATP601 2.4 79.8 1.0
OG1 B:THR177 2.6 219.7 1.0
PB B:ATP601 3.3 79.8 1.0
PG B:ATP601 3.5 79.8 0.8
O3A B:ATP601 3.6 79.8 1.0
CB B:THR177 3.7 219.7 1.0
O3B B:ATP601 3.7 79.8 1.0
NE2 B:GLN201 3.9 229.7 1.0
OD1 B:ASP262 4.2 251.3 1.0
N B:THR177 4.3 219.7 1.0
OD2 B:ASP262 4.3 251.3 1.0
O3G B:ATP601 4.5 79.8 0.8
O1G B:ATP601 4.5 79.8 0.8
CE B:LYS176 4.5 208.0 1.0
CA B:THR177 4.6 219.7 1.0
CG B:ASP262 4.7 251.3 1.0
O1B B:ATP601 4.7 79.8 1.0
CB B:LYS176 4.7 208.0 1.0
CG2 B:THR177 4.7 219.7 1.0
O1A B:ATP601 4.9 79.8 1.0
CD B:GLN201 4.9 229.7 1.0
PA B:ATP601 4.9 79.8 1.0
OE1 B:GLN201 5.0 229.7 1.0

Magnesium binding site 3 out of 4 in 7p3n

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Magnesium binding site 3 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg602

b:86.2
occ:1.00
O2G C:ATP601 2.0 88.0 0.8
O2B C:ATP601 2.3 88.0 1.0
CG2 C:THR177 2.9 194.8 1.0
PB C:ATP601 3.2 88.0 1.0
PG C:ATP601 3.2 88.0 0.8
O3B C:ATP601 3.5 88.0 1.0
O3A C:ATP601 3.5 88.0 1.0
OG1 C:THR177 3.9 194.8 1.0
CB C:THR177 4.0 194.8 1.0
O3G C:ATP601 4.1 88.0 0.8
O1G C:ATP601 4.3 88.0 0.8
O1B C:ATP601 4.6 88.0 1.0
N C:THR177 4.7 194.8 1.0
OD2 C:ASP262 4.8 224.8 1.0
OD1 C:ASP262 4.9 224.8 1.0
NZ C:LYS176 4.9 186.9 1.0
CA C:THR177 5.0 194.8 1.0

Magnesium binding site 4 out of 4 in 7p3n

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Magnesium binding site 4 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 2) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg602

b:87.0
occ:1.00
O1B E:ADP601 2.2 84.7 1.0
O2B E:ADP601 2.5 84.7 1.0
PB E:ADP601 2.6 84.7 1.0
O3B E:ADP601 2.9 84.7 1.0
CE E:LYS154 3.7 238.7 1.0
NH1 E:ARG181 4.1 242.0 1.0
O3A E:ADP601 4.2 84.7 1.0
OG1 E:THR155 4.2 230.4 1.0
CB E:LYS154 4.3 238.7 1.0
NZ E:LYS154 4.3 238.7 1.0
N E:GLY151 4.6 249.9 1.0
CD E:LYS154 4.8 238.7 1.0
OE2 E:GLU180 4.8 271.4 1.0
O E:GLY149 4.9 277.8 1.0
N E:THR155 5.0 230.4 1.0

Reference:

J.K.Demmer, B.P.Phillips, O.L.Uhrig, A.Filloux, L.P.Allsopp, M.Bublitz, T.Meier. Structure of Atp Synthase From Eskape Pathogen Acinetobacter Baumannii. Sci Adv V. 8 L5966 2022.
ISSN: ESSN 2375-2548
PubMed: 35171679
DOI: 10.1126/SCIADV.ABL5966
Page generated: Thu Apr 6 18:27:30 2023

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