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Magnesium in PDB 7p3w: F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)

Enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)

All present enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3):
7.1.2.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3) (pdb code 7p3w). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3), PDB code: 7p3w:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 7p3w

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Magnesium binding site 1 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:155.8
occ:1.00
OG1 A:THR177 2.1 172.2 1.0
O2G A:ATP601 2.3 180.6 0.8
O2B A:ATP601 2.5 180.6 1.0
PG A:ATP601 3.3 180.6 0.8
PB A:ATP601 3.3 180.6 1.0
O1G A:ATP601 3.4 180.6 0.8
CB A:THR177 3.5 172.2 1.0
O1B A:ATP601 3.5 180.6 1.0
O3B A:ATP601 3.6 180.6 1.0
NE2 A:GLN201 4.0 194.7 1.0
CG2 A:THR177 4.1 172.2 1.0
OD1 A:ASP262 4.4 197.2 1.0
CA A:THR177 4.5 172.2 1.0
N A:THR177 4.6 172.2 1.0
OD2 A:ASP262 4.6 197.2 1.0
O3G A:ATP601 4.7 180.6 0.8
O3A A:ATP601 4.8 180.6 1.0
CD A:GLN201 4.9 194.7 1.0

Magnesium binding site 2 out of 4 in 7p3w

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Magnesium binding site 2 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:163.7
occ:1.00
OG1 B:THR177 2.1 171.5 1.0
O2G B:ATP601 2.1 184.7 0.8
O2B B:ATP601 2.8 184.7 1.0
O1B B:ATP601 3.0 184.7 1.0
PB B:ATP601 3.0 184.7 1.0
PG B:ATP601 3.2 184.7 0.8
O3B B:ATP601 3.2 184.7 1.0
CB B:THR177 3.5 171.5 1.0
O1G B:ATP601 3.8 184.7 0.8
NE2 B:GLN201 3.9 190.2 1.0
N B:THR177 4.1 171.5 1.0
OD2 B:ASP262 4.2 211.2 1.0
OD1 B:ASP262 4.2 211.2 1.0
CG2 B:THR177 4.3 171.5 1.0
CA B:THR177 4.4 171.5 1.0
CE B:LYS176 4.5 161.7 1.0
O3G B:ATP601 4.5 184.7 0.8
NZ B:LYS176 4.6 161.7 1.0
O3A B:ATP601 4.7 184.7 1.0
CG B:ASP262 4.7 211.2 1.0
CB B:LYS176 5.0 161.7 1.0
OD1 B:ASP263 5.0 214.5 1.0

Magnesium binding site 3 out of 4 in 7p3w

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Magnesium binding site 3 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg602

b:176.6
occ:1.00
OG1 C:THR177 2.1 164.1 1.0
O2G C:ATP601 2.2 209.5 1.0
O2B C:ATP601 2.9 209.5 1.0
CB C:THR177 3.5 164.1 1.0
PG C:ATP601 3.6 209.5 1.0
PB C:ATP601 3.9 209.5 1.0
O3B C:ATP601 4.1 209.5 1.0
OD1 C:ASP262 4.1 214.1 1.0
CG2 C:THR177 4.3 164.1 1.0
N C:THR177 4.3 164.1 1.0
CA C:THR177 4.3 164.1 1.0
O3G C:ATP601 4.4 209.5 1.0
OD2 C:ASP262 4.4 214.1 1.0
O1B C:ATP601 4.5 209.5 1.0
O1G C:ATP601 4.7 209.5 1.0
CG C:ASP262 4.7 214.1 1.0
OE1 C:GLN201 4.7 212.8 1.0
OD2 C:ASP263 4.9 224.3 1.0

Magnesium binding site 4 out of 4 in 7p3w

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Magnesium binding site 4 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 3) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg602

b:165.5
occ:1.00
O3B F:ADP601 2.2 210.1 1.0
O2B F:ADP601 2.4 210.1 1.0
PB F:ADP601 2.8 210.1 1.0
O3A F:ADP601 3.8 210.1 1.0
CE F:LYS154 3.9 197.6 1.0
O1B F:ADP601 4.0 210.1 1.0
NH1 F:ARG181 4.0 192.1 1.0
NZ F:LYS154 4.3 197.6 1.0
OG1 F:THR155 4.4 199.7 1.0
NH2 F:ARG181 4.4 192.1 1.0
OD1 F:ASN248 4.5 228.3 1.0
ND2 F:ASN248 4.5 228.3 1.0
N F:GLY151 4.5 201.9 1.0
CZ F:ARG181 4.7 192.1 1.0
O B:SER348 4.9 196.6 1.0
CG F:ASN248 4.9 228.3 1.0
O F:GLY149 5.0 216.0 1.0

Reference:

J.K.Demmer, B.P.Phillips, O.L.Uhrig, A.Filloux, L.P.Allsopp, M.Bublitz, T.Meier. Structure of Atp Synthase From Eskape Pathogen Acinetobacter Baumannii. Sci Adv V. 8 L5966 2022.
ISSN: ESSN 2375-2548
PubMed: 35171679
DOI: 10.1126/SCIADV.ABL5966
Page generated: Thu Oct 3 04:00:55 2024

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