Magnesium in PDB 7pem: Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State

All present enzymatic activity of Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State:
7.6.2.1;

The binding sites of Magnesium atom in the Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State (pdb code 7pem). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State, PDB code: 7pem:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Phophorylated DRS2P-CDC50P in A Ps and Atp-Bound E2P State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1402 b:45.2 occ:1.00 O A:HOH1501 2.1 44.7 1.0 O A:THR562 2.1 45.3 1.0 OD2 A:PHD560 2.3 42.3 1.0 O A:HOH1502 2.5 49.2 1.0 OP2 A:PHD560 2.6 42.3 1.0 O A:ASP954 2.7 46.7 1.0 C A:THR562 3.3 45.3 1.0 CG A:PHD560 3.4 42.3 1.0 C A:ASP954 3.4 46.7 1.0 CB A:ASP954 3.5 46.7 1.0 P A:PHD560 3.6 42.3 1.0 CA A:GLY563 3.8 42.0 1.0 CA A:ASP954 3.8 46.7 1.0 N A:ASP954 3.8 46.7 1.0 OP1 A:PHD560 3.8 42.3 1.0 OD1 A:PHD560 3.9 42.3 1.0 N A:GLY563 3.9 42.0 1.0 OD1 A:ASP958 4.0 44.8 1.0 OG1 A:THR564 4.0 40.4 1.0 ND2 A:ASN957 4.1 48.7 1.0 N A:THR564 4.2 40.4 1.0 C A:GLY563 4.2 42.0 1.0 CG A:ASP954 4.3 46.7 1.0 CA A:THR562 4.5 45.3 1.0 CB A:PHD560 4.5 42.3 1.0 N A:GLY955 4.5 48.6 1.0 N A:THR562 4.7 45.3 1.0 OD1 A:ASP954 4.7 46.7 1.0 O A:ALA337 4.8 62.1 1.0 CB A:THR562 4.9 45.3 1.0 CB A:THR564 5.0 40.4 1.0 OP3 A:PHD560 5.0 42.3 1.0

Y.Wang, J.A.Lyons, M.Timcenko, F.Kummerer, B.L.De Groot, P.Nissen, V.Gapsys, K.Lindorff-Larsen. Substrate Transport and Specificity in A Phospholipid Flippase To Be Published.