Magnesium in PDB 7psn: S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+

The binding sites of Magnesium atom in the S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+ (pdb code 7psn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+, PDB code: 7psn:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg702 b:82.3 occ:1.00 OE1 A:GLN517 1.9 82.2 1.0 O2G A:ANP701 2.0 79.7 1.0 O2B A:ANP701 2.0 79.7 1.0 OG A:SER476 2.3 78.4 1.0 CD A:GLN517 2.6 82.2 1.0 NE2 A:GLN517 2.8 82.2 1.0 PG A:ANP701 3.3 79.7 1.0 PB A:ANP701 3.4 79.7 1.0 CB A:SER476 3.4 78.4 1.0 OD2 A:ASP597 3.6 86.4 1.0 N3B A:ANP701 3.8 79.7 1.0 OD1 A:ASP597 4.0 86.4 1.0 CG A:GLN517 4.0 82.2 1.0 O1A A:ANP701 4.0 79.7 1.0 O1B A:ANP701 4.1 79.7 1.0 O3G A:ANP701 4.1 79.7 1.0 CG A:ASP597 4.2 86.4 1.0 O1G A:ANP701 4.3 79.7 1.0 CB A:GLN517 4.4 82.2 1.0 N A:SER476 4.5 78.4 1.0 CA A:SER476 4.6 78.4 1.0 O3A A:ANP701 4.6 79.7 1.0 OE2 A:GLU598 4.6 91.1 1.0 PA A:ANP701 4.8 79.7 1.0 N B:GLY575 4.9 83.0 1.0

Magnesium binding site 2 out of 2 in the S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of S. Cerevisiae ATM1 in MSP1E3D1 Nanodiscs with Bound Amp-Pnp and MG2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg702 b:82.1 occ:1.00 OE1 B:GLN517 1.9 82.3 1.0 O2G B:ANP701 2.0 79.8 1.0 O2B B:ANP701 2.0 79.8 1.0 OG B:SER476 2.3 78.4 1.0 CD B:GLN517 2.6 82.3 1.0 NE2 B:GLN517 2.8 82.3 1.0 PG B:ANP701 3.3 79.8 1.0 PB B:ANP701 3.4 79.8 1.0 CB B:SER476 3.4 78.4 1.0 OD2 B:ASP597 3.6 86.4 1.0 N3B B:ANP701 3.8 79.8 1.0 OD1 B:ASP597 4.0 86.4 1.0 CG B:GLN517 4.0 82.3 1.0 O1A B:ANP701 4.0 79.8 1.0 O1B B:ANP701 4.1 79.8 1.0 O3G B:ANP701 4.1 79.8 1.0 CG B:ASP597 4.2 86.4 1.0 O1G B:ANP701 4.3 79.8 1.0 CB B:GLN517 4.4 82.3 1.0 N B:SER476 4.5 78.4 1.0 CA B:SER476 4.6 78.4 1.0 O3A B:ANP701 4.6 79.8 1.0 OE2 B:GLU598 4.6 91.1 1.0 PA B:ANP701 4.8 79.8 1.0 N A:GLY575 4.9 82.9 1.0

T.L.Ellinghaus, T.Marcellino, V.Srinivasan, R.Lill, W.Kuhlbrandt. Conformational Changes in the Yeast Mitochondrial Abc Transporter ATM1 During the Transport Cycle. Sci Adv V. 7 K2392 2021.
ISSN: ESSN 2375-2548
PubMed: 34936443
DOI: 10.1126/SCIADV.ABK2392