Magnesium in PDB 7q6f: Vibrio Maritimus Ftsa 1-396 Atp, Double Filament

Protein crystallography data

The structure of Vibrio Maritimus Ftsa 1-396 Atp, Double Filament, PDB code: 7q6f was solved by T.Nierhaus, D.Kureisaite-Ciziene, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.42 / 3.31
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.503, 109.628, 92.49, 90, 102.14, 90
R / Rfree (%) 23 / 26.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Vibrio Maritimus Ftsa 1-396 Atp, Double Filament (pdb code 7q6f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Vibrio Maritimus Ftsa 1-396 Atp, Double Filament, PDB code: 7q6f:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7q6f

Go back to Magnesium Binding Sites List in 7q6f
Magnesium binding site 1 out of 2 in the Vibrio Maritimus Ftsa 1-396 Atp, Double Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Vibrio Maritimus Ftsa 1-396 Atp, Double Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:15.0
occ:1.00
O1B A:ATP501 2.3 49.1 1.0
O2G A:ATP501 2.6 49.1 1.0
PG A:ATP501 3.5 43.5 1.0
PB A:ATP501 3.5 44.4 1.0
OD1 A:ASP210 3.6 48.9 1.0
O1G A:ATP501 3.6 50.4 1.0
O3B A:ATP501 3.7 39.5 1.0
OG1 A:THR378 3.8 33.6 1.0
OD1 A:ASP14 3.8 46.0 1.0
OG A:SER188 4.0 45.9 1.0
OD2 A:ASP14 4.0 34.6 1.0
CG A:ASP14 4.3 39.3 1.0
CB A:THR378 4.4 36.2 1.0
CG A:ASP210 4.4 46.5 1.0
O3A A:ATP501 4.4 39.6 1.0
OD2 A:ASP210 4.5 40.7 1.0
O1A A:ATP501 4.6 46.8 1.0
O2B A:ATP501 4.7 43.4 1.0
CG2 A:THR378 4.7 29.7 1.0
O3G A:ATP501 4.9 32.2 1.0

Magnesium binding site 2 out of 2 in 7q6f

Go back to Magnesium Binding Sites List in 7q6f
Magnesium binding site 2 out of 2 in the Vibrio Maritimus Ftsa 1-396 Atp, Double Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Vibrio Maritimus Ftsa 1-396 Atp, Double Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg502

b:22.4
occ:1.00
O1B B:ATP501 2.6 46.2 1.0
O1G B:ATP501 2.9 46.4 1.0
O2G B:ATP501 3.3 39.1 1.0
PG B:ATP501 3.4 36.0 1.0
PB B:ATP501 3.6 44.8 1.0
O3B B:ATP501 3.7 34.3 1.0
OD1 B:ASP210 3.8 45.9 1.0
OG1 B:THR378 3.8 47.5 1.0
OD1 B:ASP14 3.9 60.4 1.0
OD2 B:ASP14 4.1 56.5 1.0
O3A B:ATP501 4.3 41.4 1.0
O1A B:ATP501 4.4 43.5 1.0
CG B:ASP14 4.4 53.8 1.0
CG B:ASP210 4.4 47.1 1.0
CB B:THR378 4.4 43.6 1.0
OD2 B:ASP210 4.5 48.0 1.0
CG2 B:THR378 4.8 42.1 1.0
PA B:ATP501 4.9 42.3 1.0
O3G B:ATP501 5.0 33.4 1.0
O2B B:ATP501 5.0 40.4 1.0
OD2 B:ASP217 5.0 46.6 1.0

Reference:

T.Nierhaus, S.H.Mclaughlin, F.Burmann, D.Kureisaite-Ciziene, S.L.Maslen, J.M.Skehel, C.W.H.Yu, S.M.V.Freund, L.F.H.Funke, J.W.Chin, J.Lowe. Bacterial Divisome Protein Ftsa Forms Curved Antiparallel Double Filaments When Binding to Ftsn. Nat Microbiol V. 7 1686 2022.
ISSN: ESSN 2058-5276
PubMed: 36123441
DOI: 10.1038/S41564-022-01206-9
Page generated: Thu Apr 6 19:31:58 2023

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