Magnesium in PDB 7q6i: Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement

The structure of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement, PDB code: 7q6i was solved by T.Nierhaus, D.Kureisaite-Ciziene, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.88 / 3.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	98.692, 119.993, 329.788, 90, 93.76, 90
R / Rfree (%)	24.1 / 28.7

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Magnesium atom in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement (pdb code 7q6i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 16 binding sites of Magnesium where determined in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement, PDB code: 7q6i:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:41.6 occ:1.00 O1G A:ATP501 2.6 77.5 1.0 O2G A:ATP501 2.8 87.5 1.0 PG A:ATP501 3.0 86.8 1.0 O1B A:ATP501 3.2 68.3 1.0 OD1 A:ASP14 3.3 70.8 1.0 O3B A:ATP501 3.4 79.2 1.0 OD2 A:ASP210 3.5 90.4 1.0 OD2 A:ASP14 3.6 91.8 1.0 OG1 A:THR378 3.7 78.0 1.0 PB A:ATP501 3.8 81.2 1.0 CG A:ASP14 3.9 80.8 1.0 OD1 A:ASP210 4.0 89.5 1.0 CG A:ASP210 4.1 97.9 1.0 CB A:THR378 4.1 72.4 1.0 CG2 A:THR378 4.2 57.6 1.0 O3A A:ATP501 4.4 60.1 1.0 O3G A:ATP501 4.6 61.3 1.0 OG A:SER188 4.7 73.8 1.0 CA A:GLY16 4.8 84.3 1.0 OD2 A:ASP217 4.9 77.5 1.0 O1A A:ATP501 4.9 73.8 1.0 CG2 A:THR215 5.0 78.7 1.0

Magnesium binding site 2 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:39.8 occ:1.00 O1B B:ATP501 2.6 82.7 1.0 O1G B:ATP501 2.6 82.5 1.0 PG B:ATP501 3.3 95.7 1.0 OD2 B:ASP210 3.3 96.0 1.0 O3B B:ATP501 3.3 80.1 1.0 O2G B:ATP501 3.4 86.5 1.0 PB B:ATP501 3.5 91.7 1.0 OD2 B:ASP14 3.6 100.4 1.0 OG1 B:THR378 3.6 79.3 1.0 OD1 B:ASP14 3.7 95.5 1.0 OD1 B:ASP210 4.0 90.8 1.0 CG B:ASP210 4.0 95.7 1.0 CG B:ASP14 4.0 93.5 1.0 CB B:THR378 4.1 74.7 1.0 O1A B:ATP501 4.3 74.5 1.0 CG2 B:THR378 4.3 67.2 1.0 O3A B:ATP501 4.3 75.6 1.0 OD2 B:ASP217 4.6 77.3 1.0 O3G B:ATP501 4.8 70.3 1.0 O2B B:ATP501 4.8 85.1 1.0 PA B:ATP501 4.9 79.7 1.0

Magnesium binding site 3 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg502 b:56.1 occ:1.00 O2G C:ATP501 2.0 85.8 1.0 O1B C:ATP501 2.9 92.2 1.0 OD2 C:ASP210 2.9 105.7 1.0 PG C:ATP501 3.5 86.9 1.0 OG1 C:THR378 3.6 94.3 1.0 CG C:ASP210 3.7 101.7 1.0 OD1 C:ASP210 3.8 98.1 1.0 O3B C:ATP501 3.8 65.0 1.0 PB C:ATP501 3.8 85.7 1.0 OD1 C:ASP14 3.8 86.5 1.0 CB C:THR378 3.9 83.3 1.0 CG2 C:THR378 4.0 62.5 1.0 OD2 C:ASP14 4.0 84.6 1.0 O1G C:ATP501 4.3 74.9 1.0 O3A C:ATP501 4.3 62.4 1.0 CG C:ASP14 4.3 82.3 1.0 O3G C:ATP501 4.4 86.5 1.0 OD2 C:ASP217 4.6 99.2 1.0 O1A C:ATP501 4.8 74.6 1.0 OG C:SER188 4.9 94.3 1.0

Magnesium binding site 4 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:59.0 occ:1.00 O2G D:ATP501 2.1 82.0 1.0 O1B D:ATP501 2.6 69.1 1.0 OG1 D:THR378 3.4 73.1 1.0 OD1 D:ASP14 3.5 73.6 1.0 OD2 D:ASP14 3.5 73.7 1.0 PG D:ATP501 3.5 75.7 1.0 PB D:ATP501 3.7 71.0 1.0 OD1 D:ASP210 3.7 93.8 1.0 O3B D:ATP501 3.8 56.5 1.0 CG D:ASP14 3.9 73.1 1.0 CB D:THR378 3.9 73.2 1.0 CG2 D:THR378 4.1 68.2 1.0 O1A D:ATP501 4.2 88.5 1.0 O3G D:ATP501 4.3 70.0 1.0 CG D:ASP210 4.4 91.7 1.0 O3A D:ATP501 4.4 53.5 1.0 OD2 D:ASP210 4.4 93.8 1.0 O1G D:ATP501 4.5 82.6 1.0 OG D:SER188 4.8 78.7 1.0 OD2 D:ASP217 4.9 84.3 1.0 PA D:ATP501 4.9 73.2 1.0

Magnesium binding site 5 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg502 b:52.5 occ:1.00 O3B E:ATP501 2.4 105.2 1.0 O1G E:ATP501 3.1 91.9 1.0 PG E:ATP501 3.2 97.2 1.0 O1B E:ATP501 3.2 78.3 1.0 PB E:ATP501 3.3 101.9 1.0 OD1 E:ASP210 3.4 106.8 1.0 OG1 E:THR378 3.4 94.2 1.0 OD1 E:ASP14 3.6 89.3 1.0 OD2 E:ASP14 3.7 87.1 1.0 O2G E:ATP501 3.7 83.4 1.0 CB E:THR378 3.9 96.3 1.0 O3A E:ATP501 4.0 76.1 1.0 OD2 E:ASP210 4.0 90.3 1.0 CG E:ASP210 4.0 100.4 1.0 CG E:ASP14 4.1 90.8 1.0 CG2 E:THR378 4.2 76.9 1.0 O3G E:ATP501 4.6 62.9 1.0 O1A E:ATP501 4.6 84.8 1.0 O2B E:ATP501 4.6 94.7 1.0 CA E:GLY16 4.9 89.7 1.0 PA E:ATP501 4.9 85.2 1.0 OG E:SER188 5.0 97.6 1.0

Magnesium binding site 6 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg502 b:56.7 occ:1.00 O1G F:ATP501 2.5 93.2 1.0 O1B F:ATP501 2.9 93.9 1.0 OG1 F:THR378 3.3 89.4 1.0 PG F:ATP501 3.4 86.6 1.0 O2G F:ATP501 3.5 85.2 1.0 OD1 F:ASP210 3.5 106.2 1.0 OD1 F:ASP14 3.5 105.9 1.0 CG2 F:THR378 3.8 98.6 1.0 O3B F:ATP501 3.9 84.7 1.0 CB F:THR378 3.9 93.9 1.0 PB F:ATP501 3.9 108.9 1.0 OD2 F:ASP14 4.0 102.5 1.0 CG F:ASP210 4.1 103.5 1.0 CG F:ASP14 4.2 106.8 1.0 OD2 F:ASP217 4.2 102.7 1.0 OG F:SER188 4.3 92.1 1.0 OD2 F:ASP210 4.3 101.4 1.0 O3A F:ATP501 4.8 84.7 1.0 CB F:SER188 4.8 96.4 1.0 O3G F:ATP501 4.8 73.4 1.0 O1A F:ATP501 4.9 94.1 1.0

Magnesium binding site 7 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg502 b:80.0 occ:1.00 O3B G:ATP501 2.4 111.2 1.0 O1G G:ATP501 3.0 97.9 1.0 PG G:ATP501 3.1 104.4 1.0 OD1 G:ASP210 3.4 113.7 1.0 OG1 G:THR378 3.4 116.0 1.0 PB G:ATP501 3.5 123.0 1.0 O1B G:ATP501 3.5 117.2 1.0 O2G G:ATP501 3.5 103.3 1.0 OD1 G:ASP14 3.6 122.5 1.0 OD2 G:ASP14 3.7 124.5 1.0 CB G:THR378 3.8 124.1 1.0 OD2 G:ASP210 3.9 103.1 1.0 O3A G:ATP501 3.9 115.3 1.0 CG G:ASP210 4.0 107.2 1.0 CG G:ASP14 4.0 126.3 1.0 O1A G:ATP501 4.2 102.9 1.0 CG2 G:THR378 4.2 115.1 1.0 O3G G:ATP501 4.5 80.2 1.0 PA G:ATP501 4.7 106.5 1.0 O2B G:ATP501 4.8 99.0 1.0

Magnesium binding site 8 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg502 b:67.2 occ:1.00 O1B H:ATP501 2.6 86.3 1.0 O1G H:ATP501 2.9 87.1 1.0 O2G H:ATP501 3.0 99.1 1.0 PG H:ATP501 3.2 90.4 1.0 O3B H:ATP501 3.2 92.0 1.0 OD1 H:ASP210 3.2 102.3 1.0 PB H:ATP501 3.4 90.5 1.0 OD2 H:ASP14 3.6 110.9 1.0 OD1 H:ASP14 3.6 113.2 1.0 OG1 H:THR378 3.8 108.7 1.0 CG H:ASP210 4.0 101.4 1.0 CB H:THR378 4.0 100.8 1.0 CG H:ASP14 4.0 107.6 1.0 OD2 H:ASP210 4.0 100.0 1.0 O3A H:ATP501 4.2 82.6 1.0 CG2 H:THR378 4.3 94.0 1.0 O1A H:ATP501 4.3 100.5 1.0 O3G H:ATP501 4.7 81.1 1.0 O2B H:ATP501 4.7 94.8 1.0 CA H:GLY212 4.7 105.1 1.0 OD2 H:ASP217 4.9 111.2 1.0 PA H:ATP501 4.9 94.8 1.0

Magnesium binding site 9 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ I:Mg502 b:57.4 occ:1.00 O1B I:ATP501 2.7 105.9 1.0 O3B I:ATP501 3.1 112.8 1.0 O1G I:ATP501 3.1 117.0 1.0 OD1 I:ASP14 3.3 77.1 1.0 PB I:ATP501 3.4 118.2 1.0 OG1 I:THR378 3.5 70.9 1.0 OD2 I:ASP14 3.5 85.7 1.0 PG I:ATP501 3.7 118.0 1.0 OD1 I:ASP210 3.8 109.4 1.0 CG I:ASP14 3.8 91.3 1.0 CB I:THR378 3.9 84.7 1.0 O3A I:ATP501 4.1 102.8 1.0 CG2 I:THR378 4.2 83.1 1.0 CG I:ASP210 4.5 111.2 1.0 OD2 I:ASP210 4.5 112.3 1.0 O1A I:ATP501 4.7 114.9 1.0 O2G I:ATP501 4.7 94.6 1.0 O2B I:ATP501 4.8 114.6 1.0 CA I:GLY16 4.9 95.2 1.0 O3G I:ATP501 4.9 120.4 1.0 OG I:SER188 5.0 105.7 1.0

Magnesium binding site 10 out of 16 in the Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Vibrio Maritimus Ftsa 1-396 Atp and Ftsn 1-29, Bent Tetramers in Double Filament Arrangement within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg502 b:55.5 occ:1.00 O3B J:ATP501 2.8 86.0 1.0 O1B J:ATP501 3.1 86.9 1.0 OG1 J:THR378 3.3 94.4 1.0 OD1 J:ASP14 3.3 96.0 1.0 OD2 J:ASP14 3.5 92.7 1.0 PG J:ATP501 3.5 106.4 1.0 O2G J:ATP501 3.5 81.1 1.0 O1G J:ATP501 3.5 116.2 1.0 PB J:ATP501 3.5 96.6 1.0 OD2 J:ASP210 3.7 109.5 1.0 CG J:ASP14 3.8 96.0 1.0 CB J:THR378 3.8 96.9 1.0 CG2 J:THR378 4.1 88.8 1.0 OD1 J:ASP210 4.2 114.7 1.0 CG J:ASP210 4.3 114.9 1.0 O3A J:ATP501 4.5 88.7 1.0 O2B J:ATP501 4.7 98.5 1.0 O1A J:ATP501 4.8 83.8 1.0 CA J:GLY16 4.8 91.2 1.0 O3G J:ATP501 4.9 76.5 1.0

T.Nierhaus, S.H.Mclaughlin, F.Burmann, D.Kureisaite-Ciziene, S.L.Maslen, J.M.Skehel, C.W.H.Yu, S.M.V.Freund, L.F.H.Funke, J.W.Chin, J.Lowe. Bacterial Divisome Protein Ftsa Forms Curved Antiparallel Double Filaments When Binding to Ftsn. Nat Microbiol V. 7 1686 2022.
ISSN: ESSN 2058-5276
PubMed: 36123441
DOI: 10.1038/S41564-022-01206-9