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Magnesium in PDB 7qek: Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa).

Protein crystallography data

The structure of Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa)., PDB code: 7qek was solved by J.A.Gavira, M.Rico-Jimenez, A.Castellvi, T.Krell, M.A.Matilla, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.26 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.213, 76.036, 94.134, 90, 90, 90
R / Rfree (%) 20.7 / 25.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa). (pdb code 7qek). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa)., PDB code: 7qek:

Magnesium binding site 1 out of 1 in 7qek

Go back to Magnesium Binding Sites List in 7qek
Magnesium binding site 1 out of 1 in the Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa).


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:40.3
occ:1.00
OH A:TYR169 2.8 36.7 1.0
OH B:TYR169 2.9 31.1 1.0
CZ A:TYR169 3.7 42.1 1.0
CE2 B:TYR169 3.7 41.5 1.0
CE2 A:TYR169 3.8 33.8 1.0
CZ B:TYR169 3.8 38.3 1.0
CG B:PRO52 3.8 46.6 1.0
CG A:PRO52 3.8 36.5 1.0
CB B:PRO52 4.0 41.0 1.0
CB A:PRO52 4.1 43.2 1.0
O B:ALA79 4.5 49.8 1.0
CB B:ALA79 4.5 38.9 1.0
CB A:ALA79 4.6 32.4 1.0
O A:ALA79 4.6 51.6 1.0
CG2 A:THR167 4.7 39.9 1.0
CG2 B:THR167 4.8 41.8 1.0
CA B:PRO52 4.8 40.1 1.0
C B:ALA79 4.9 44.0 1.0
CA A:PRO52 4.9 35.2 1.0

Reference:

J.A.Gavira, M.Rico-Jimenez, A.Ortega, A.Castellvi, T.Krell, M.A.Matilla. Structure of the Ligand Binding Domain of the Antibiotic Biosynthesis Regulator Admx From the Rhizobacterium Serratia Plymuthica A153 Bound to the Auxin Indole-3-Piruvic Acid (Ipa). To Be Published.
Page generated: Thu Oct 3 05:05:48 2024

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