Magnesium in PDB 7qen: S.C. Condensin Core in Dna- and Atp-Bound State

The binding sites of Magnesium atom in the S.C. Condensin Core in Dna- and Atp-Bound State (pdb code 7qen). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the S.C. Condensin Core in Dna- and Atp-Bound State, PDB code: 7qen:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the S.C. Condensin Core in Dna- and Atp-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of S.C. Condensin Core in Dna- and Atp-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2001 b:64.2 occ:1.00 OE1 B:GLN302 2.1 61.1 1.0 O2B B:ATP2000 2.1 74.7 1.0 OG B:SER192 2.1 65.4 1.0 O2G B:ATP2000 2.8 74.7 1.0 O1G B:ATP2000 3.1 74.7 1.0 CD B:GLN302 3.3 61.1 1.0 CB B:SER192 3.4 65.4 1.0 PG B:ATP2000 3.4 74.7 1.0 PB B:ATP2000 3.4 74.7 1.0 O3B B:ATP2000 3.9 74.7 1.0 NE2 B:GLN302 4.0 61.1 1.0 CA B:SER192 4.4 65.4 1.0 N B:SER192 4.4 65.4 1.0 O1B B:ATP2000 4.4 74.7 1.0 CG B:GLN302 4.4 61.1 1.0 O1A B:ATP2000 4.5 74.7 1.0 O3A B:ATP2000 4.5 74.7 1.0 CB B:GLN302 4.6 61.1 1.0 NH2 B:ARG210 4.7 67.0 1.0 PA B:ATP2000 4.8 74.7 1.0 O3G B:ATP2000 4.9 74.7 1.0 O2A B:ATP2000 4.9 74.7 1.0 OD2 B:ASP1351 5.0 62.8 1.0 CG2 B:ILE1381 5.0 56.2 1.0 CB A:SER1085 5.0 61.1 1.0

Magnesium binding site 2 out of 2 in the S.C. Condensin Core in Dna- and Atp-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of S.C. Condensin Core in Dna- and Atp-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2001 b:59.6 occ:1.00 OE1 A:GLN147 2.1 55.6 1.0 O2B A:ATP2000 2.1 74.4 1.0 OG A:SER39 2.1 61.2 1.0 O2G A:ATP2000 2.4 74.4 1.0 CD A:GLN147 2.7 55.6 1.0 NE2 A:GLN147 3.0 55.6 1.0 CB A:SER39 3.3 61.2 1.0 PB A:ATP2000 3.3 74.4 1.0 PG A:ATP2000 3.6 74.4 1.0 O3B A:ATP2000 3.6 74.4 1.0 OD1 A:ASP1112 3.9 59.2 1.0 CG A:GLN147 4.0 55.6 1.0 CB A:GLN147 4.3 55.6 1.0 OG B:SER1324 4.3 55.7 1.0 N A:SER39 4.3 61.2 1.0 CA A:SER39 4.3 61.2 1.0 O1B A:ATP2000 4.4 74.4 1.0 O3A A:ATP2000 4.4 74.4 1.0 O1A A:ATP2000 4.4 74.4 1.0 OD2 A:ASP1112 4.5 59.2 1.0 O1G A:ATP2000 4.5 74.4 1.0 NE2 A:GLN1113 4.6 57.3 1.0 CG A:ASP1112 4.6 59.2 1.0 O3G A:ATP2000 4.6 74.4 1.0 PA A:ATP2000 4.7 74.4 1.0 O2A A:ATP2000 4.7 74.4 1.0 CD A:GLN1113 4.8 57.3 1.0 OE1 A:GLN1113 4.9 57.3 1.0

I.A.Shaltiel, S.Datta, L.Lecomte, M.Hassler, M.Kschonsak, S.Bravo, C.Stober, J.Ormanns, S.Eustermann, C.H.Haering. A Hold-and-Feed Mechanism Drives Directional Dna Loop Extrusion By Condensin. Science V. 376 1087 2022.
ISSN: ESSN 1095-9203
PubMed: 35653469
DOI: 10.1126/SCIENCE.ABM4012