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Magnesium in PDB 7qv8: Leishmania Infantum BRC1 Repeat in Complex with LIRAD51

Protein crystallography data

The structure of Leishmania Infantum BRC1 Repeat in Complex with LIRAD51, PDB code: 7qv8 was solved by T.Pantelejevs, M.Hyvonen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.31 / 2.15
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 61.004, 61.004, 119.224, 90, 90, 90
R / Rfree (%) 27.8 / 30.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Leishmania Infantum BRC1 Repeat in Complex with LIRAD51 (pdb code 7qv8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Leishmania Infantum BRC1 Repeat in Complex with LIRAD51, PDB code: 7qv8:

Magnesium binding site 1 out of 1 in 7qv8

Go back to Magnesium Binding Sites List in 7qv8
Magnesium binding site 1 out of 1 in the Leishmania Infantum BRC1 Repeat in Complex with LIRAD51


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Leishmania Infantum BRC1 Repeat in Complex with LIRAD51 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:79.8
occ:1.00
OG1 A:THR170 2.0 77.5 1.0
O A:HOH512 2.0 78.1 1.0
O A:HOH503 2.1 67.7 1.0
O A:HOH504 2.1 78.8 1.0
OE1 A:GLU199 2.1 80.2 1.0
O3B A:ADP402 2.3 75.8 1.0
OD2 A:ASP258 2.3 75.2 1.0
OD1 A:ASP258 3.0 78.2 1.0
CG A:ASP258 3.0 73.0 1.0
CD A:GLU199 3.2 80.8 1.0
CB A:THR170 3.4 67.2 1.0
OE2 A:GLU199 3.5 84.1 1.0
PB A:ADP402 3.8 78.0 1.0
N A:THR170 4.0 74.8 1.0
CA A:THR170 4.1 66.8 1.0
OG1 A:THR201 4.1 77.0 1.0
CG2 A:THR170 4.2 75.1 1.0
O1B A:ADP402 4.4 78.7 1.0
CG A:GLU199 4.5 74.9 1.0
CB A:ASP258 4.5 70.1 1.0
O2B A:ADP402 4.6 71.6 1.0
NE2 A:GLN304 4.6 88.9 1.0
O3A A:ADP402 4.7 75.1 1.0
O2A A:ADP402 4.7 85.6 1.0
CB A:GLU199 4.8 73.3 1.0
CB A:LYS169 4.9 72.4 1.0
OG1 A:THR302 4.9 67.6 1.0

Reference:

T.Pantelejevs, M.Hyvonen. Leishmania Infantum BRC1 Repeat in Complex with LIRAD51 To Be Published.
Page generated: Thu Oct 3 07:01:46 2024

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