Magnesium in PDB 7qyv: BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109

The structure of BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109, PDB code: 7qyv was solved by A.Dalle Vedove, G.Cazzanelli, A.Caflisch, G.Lolli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.76 / 2.25
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	93.902, 93.902, 33.232, 90, 90, 120
R / Rfree (%)	19.2 / 23.7

The binding sites of Magnesium atom in the BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109 (pdb code 7qyv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109, PDB code: 7qyv:

Magnesium binding site 1 out of 1 in the BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of BAZ2A Bromodomain in Complex with Acetylpyrrole Derivative Compound 109 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1902 b:62.6 occ:1.00 O A:HOH2049 2.2 64.3 1.0 O A:HOH2014 2.3 65.8 1.0 O A:HOH2008 2.4 63.9 1.0 O A:HOH2050 2.6 59.4 1.0 OE1 A:GLU1895 3.7 60.0 0.5 OE2 A:GLU1891 3.9 60.8 1.0 OE2 A:GLU1895 4.3 69.2 0.5 CD A:GLU1895 4.4 65.5 0.5 OE1 A:GLU1895 4.5 69.4 0.5 CD A:GLU1891 4.9 62.4 1.0

A.Dalle Vedove, G.Cazzanelli, L.Batiste, J.R.Marchand, D.Spiliotopoulos, J.Corsi, V.G.D'agostino, A.Caflisch, G.Lolli. Identification of A BAZ2A-Bromodomain Hit Compound By Fragment Growing. Acs Med.Chem.Lett. V. 13 1434 2022.
ISSN: ISSN 1948-5875
PubMed: 36105334
DOI: 10.1021/ACSMEDCHEMLETT.2C00173