Magnesium in PDB 7r4d: Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map)

Enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map)

All present enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map):
1.6.5.3; 1.6.99.3; 7.1.1.2;

Other elements in 7r4d:

The structure of Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map) also contains other interesting chemical elements:

Iodine (I) 1 atom
Potassium (K) 1 atom
Zinc (Zn) 1 atom
Iron (Fe) 28 atoms
Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map) (pdb code 7r4d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map), PDB code: 7r4d:

Magnesium binding site 1 out of 1 in 7r4d

Go back to Magnesium Binding Sites List in 7r4d
Magnesium binding site 1 out of 1 in the Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Bovine Complex I in the Presence of IM1761092, Deactive Class VI (Composite Map) within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Mg1203

b:31.0
occ:1.00
O3B O:GTP1202 2.1 31.6 1.0
O1B O:GTP1202 3.1 31.6 1.0
PB O:GTP1202 3.1 31.6 1.0
O1A O:GTP1202 3.2 31.6 1.0
PG O:GTP1202 3.3 31.6 1.0
CB O:SER36 3.4 28.0 1.0
O1G O:GTP1202 3.5 31.6 1.0
OE1 O:GLU125 3.8 24.8 1.0
PA O:GTP1202 3.9 31.6 1.0
O3A O:GTP1202 4.0 31.6 1.0
O3G O:GTP1202 4.0 31.6 1.0
OG O:SER36 4.1 28.0 1.0
O2B O:GTP1202 4.3 31.6 1.0
O5' O:GTP1202 4.3 31.6 1.0
O2G O:GTP1202 4.5 31.6 1.0
OE1 O:GLU53 4.5 24.7 1.0
CA O:SER36 4.5 28.0 1.0
N O:SER36 4.6 28.0 1.0
CG O:LYS35 4.8 28.1 1.0
C5' O:GTP1202 5.0 31.6 1.0

Reference:

H.R.Bridges, J.N.Blaza, Z.Yin, I.Chung, M.N.Pollak, J.Hirst. Structural Basis of Mammalian Respiratory Complex I Inhibition By Medicinal Biguanides. Science V. 379 351 2023.
ISSN: ESSN 1095-9203
PubMed: 36701435
DOI: 10.1126/SCIENCE.ADE3332
Page generated: Thu Apr 6 21:31:39 2023

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