Magnesium in PDB 7rj1: Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp

Enzymatic activity of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp

All present enzymatic activity of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp:
5.4.99.5;

Protein crystallography data

The structure of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp, PDB code: 7rj1 was solved by P.J.Stogios, E.Evdokimova, K.Tan, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.85 / 2.16
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.751, 93.154, 99.709, 90, 106.96, 90
R / Rfree (%) 18.4 / 24.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp (pdb code 7rj1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp, PDB code: 7rj1:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 7rj1

Go back to Magnesium Binding Sites List in 7rj1
Magnesium binding site 1 out of 5 in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:59.0
occ:1.00
 O B:HOH474 2.1 60.9 1.0
O A:HOH410 2.2 48.5 1.0
O A:HOH428 2.3 48.2 1.0
OE2 A:GLU147 2.6 72.2 1.0
OD2 A:ASP29 2.7 45.8 1.0
O B:HOH486 3.1 56.0 1.0
OD1 A:ASP29 3.3 44.3 1.0
CG A:ASP29 3.4 43.0 1.0
OE2 B:GLU32 3.6 65.7 1.0
CD A:GLU147 3.7 73.0 1.0
OE2 B:GLU147 4.1 82.3 1.0
O A:HOH482 4.2 55.2 1.0
CG2 A:THR25 4.2 36.6 1.0
CG B:GLU32 4.3 45.5 1.0
CD B:GLU32 4.3 49.2 1.0
OE1 B:GLU147 4.4 83.8 1.0
OE1 A:GLU147 4.4 71.2 1.0
CG A:GLU147 4.5 58.4 1.0
CD B:GLU147 4.7 71.9 1.0
O A:THR25 4.8 35.0 1.0
CB A:ASP29 4.9 33.5 1.0
O B:HOH415 4.9 67.0 1.0
CB A:GLU147 4.9 38.6 1.0

Magnesium binding site 2 out of 5 in 7rj1

Go back to Magnesium Binding Sites List in 7rj1
Magnesium binding site 2 out of 5 in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg303

b:70.2
occ:1.00
 NE2 A:GLN134 2.2 68.0 1.0
O A:HOH481 2.5 59.2 1.0
O A:HOH431 2.5 50.6 1.0
CD A:GLN134 3.2 66.0 1.0
OE1 A:GLN134 3.5 78.8 1.0
OD2 B:ASP2 3.5 60.7 1.0
OD1 B:ASP2 3.7 57.8 1.0
CG B:ASP2 4.0 66.5 1.0
CG B:MET4 4.2 61.5 1.0
OE1 A:GLU136 4.3 59.8 1.0
O A:HOH502 4.4 44.0 1.0
OE2 A:GLU136 4.5 61.9 1.0
CB B:MET4 4.5 60.4 1.0
CG A:GLN134 4.5 57.8 1.0
CD A:GLU136 4.9 56.3 1.0
CB A:GLN134 4.9 56.5 1.0

Magnesium binding site 3 out of 5 in 7rj1

Go back to Magnesium Binding Sites List in 7rj1
Magnesium binding site 3 out of 5 in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:65.0
occ:1.00
 O A:HOH424 2.2 49.5 1.0
OD1 B:ASP29 2.2 55.7 1.0
O A:HOH496 2.3 45.7 1.0
O B:HOH409 2.4 50.1 1.0
CG B:ASP29 3.0 48.4 1.0
OD2 B:ASP29 3.0 46.8 1.0
O B:HOH486 3.7 56.0 1.0
OE1 A:GLU147 3.9 71.2 1.0
OE2 A:GLU32 3.9 48.3 1.0
OE2 B:GLU147 4.1 82.3 1.0
CG2 B:THR25 4.4 33.8 1.0
O B:THR25 4.4 38.7 1.0
CB B:ASP29 4.4 36.1 1.0
OE2 A:GLU147 4.5 72.2 1.0
CG A:GLU32 4.6 35.3 1.0
CB B:GLU147 4.6 39.1 1.0
CD A:GLU147 4.6 73.0 1.0
CD A:GLU32 4.7 46.6 1.0
CD B:GLU147 4.8 71.9 1.0
O B:HOH516 4.9 72.6 1.0
CA B:ASP29 4.9 33.6 1.0
CG B:GLU147 5.0 49.4 1.0

Magnesium binding site 4 out of 5 in 7rj1

Go back to Magnesium Binding Sites List in 7rj1
Magnesium binding site 4 out of 5 in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg302

b:83.6
occ:1.00
 OD2 C:ASP29 2.6 61.1 1.0
O C:HOH466 2.6 68.4 1.0
OE2 C:GLU147 2.6 77.9 1.0
O C:HOH497 2.6 72.6 1.0
OD1 C:ASP29 3.1 59.9 1.0
CG C:ASP29 3.2 62.3 1.0
O C:HOH470 3.7 53.1 1.0
CD C:GLU147 3.8 87.5 1.0
O C:HOH464 3.9 55.2 1.0
CG2 C:THR25 4.2 39.2 1.0
CG C:GLU147 4.4 57.2 1.0
CB C:GLU147 4.6 56.5 1.0
CB C:ASP29 4.7 49.7 1.0
OE1 C:GLU147 4.8 80.0 1.0
O C:THR25 4.8 44.7 1.0

Magnesium binding site 5 out of 5 in 7rj1

Go back to Magnesium Binding Sites List in 7rj1
Magnesium binding site 5 out of 5 in the Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Crystal Structure of ARO7P Chorismate Mutase From Candida Albicans, Complex with L-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg303

b:79.6
occ:1.00
 O C:HOH401 2.1 67.6 1.0
OE1 C:GLU147 2.8 80.0 1.0
O C:HOH464 3.3 55.2 1.0
CD C:GLU147 3.7 87.5 1.0
OE2 C:GLU147 3.7 77.9 1.0
O C:HOH466 3.9 68.4 1.0
OE2 C:GLU32 4.0 78.8 1.0
CG C:GLU32 4.3 61.2 1.0
CD C:GLU32 4.5 71.0 1.0

Reference:

P.J.Stogios, P.J.Stogios, E.Evdokimova, K.Tan, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Sat Aug 21 16:48:47 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy