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Magnesium in PDB 7rqs: Arabidopsis Rna-Dependent Rna Polymerase 2

Enzymatic activity of Arabidopsis Rna-Dependent Rna Polymerase 2

All present enzymatic activity of Arabidopsis Rna-Dependent Rna Polymerase 2:
2.7.7.48;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Arabidopsis Rna-Dependent Rna Polymerase 2 (pdb code 7rqs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Arabidopsis Rna-Dependent Rna Polymerase 2, PDB code: 7rqs:

Magnesium binding site 1 out of 1 in 7rqs

Go back to Magnesium Binding Sites List in 7rqs
Magnesium binding site 1 out of 1 in the Arabidopsis Rna-Dependent Rna Polymerase 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Arabidopsis Rna-Dependent Rna Polymerase 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1201

b:35.9
occ:1.00
OD1 A:ASP832 2.1 35.1 1.0
OD2 A:ASP832 2.5 35.1 1.0
CG A:ASP832 2.6 35.1 1.0
OD1 A:ASP834 2.8 30.9 1.0
OD1 A:ASP830 3.2 36.7 1.0
OD2 A:ASP834 3.2 30.9 1.0
CG A:ASP834 3.4 30.9 1.0
CG A:ASP830 3.9 36.7 1.0
OD2 A:ASP830 4.0 36.7 1.0
CB A:ASP832 4.1 35.1 1.0
O A:ASP830 4.3 36.7 1.0
N A:ASP830 4.8 36.7 1.0
CB A:ASP834 4.8 30.9 1.0
N A:ASP832 5.0 35.1 1.0
CA A:ASP832 5.0 35.1 1.0

Reference:

Y.Takagi, A.Fukudome, C.S.Pikaard. Structure of Rna-Dependent Rna Polymerase 2 (RDR2) From Arabidopsis Thaliana To Be Published.
Page generated: Thu Oct 3 08:05:29 2024

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