Magnesium in PDB 7sid: Human Atm Dimer Bound to NBS1

All present enzymatic activity of Human Atm Dimer Bound to NBS1:
2.7.11.1;

The binding sites of Magnesium atom in the Human Atm Dimer Bound to NBS1 (pdb code 7sid). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human Atm Dimer Bound to NBS1, PDB code: 7sid:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Human Atm Dimer Bound to NBS1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Atm Dimer Bound to NBS1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg3102 b:46.3 occ:1.00 OD1 A:ASN2875 2.4 35.7 1.0 OD2 A:ASP2889 2.9 46.4 1.0 N3B A:ANP3101 2.9 59.4 1.0 O2B A:ANP3101 3.2 59.4 1.0 O1A A:ANP3101 3.4 59.4 1.0 CG A:ASN2875 3.5 35.7 1.0 CG A:ASP2889 3.6 46.4 1.0 PB A:ANP3101 3.6 59.4 1.0 CB A:ASP2889 3.8 46.4 1.0 O5' A:ANP3101 4.0 59.4 1.0 ND2 A:ASN2875 4.1 35.7 1.0 PA A:ANP3101 4.2 59.4 1.0 CE1 A:HIS2872 4.4 36.8 1.0 PG A:ANP3101 4.4 59.4 1.0 O3A A:ANP3101 4.4 59.4 1.0 NE2 A:HIS2872 4.5 36.8 1.0 O A:GLN2874 4.5 37.2 1.0 OD1 A:ASP2889 4.6 46.4 1.0 O1G A:ANP3101 4.7 59.4 1.0 O3' A:ANP3101 4.8 59.4 1.0 CB A:ASN2875 4.8 35.7 1.0 CA A:ASN2875 4.9 35.7 1.0 O1B A:ANP3101 4.9 59.4 1.0 C3' A:ANP3101 4.9 59.4 1.0 C A:GLN2874 5.0 37.2 1.0

Magnesium binding site 2 out of 2 in the Human Atm Dimer Bound to NBS1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human Atm Dimer Bound to NBS1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg3102 b:46.4 occ:1.00 OD1 C:ASN2875 2.4 35.6 1.0 OD2 C:ASP2889 2.9 45.9 1.0 N3B C:ANP3101 2.9 59.2 1.0 O2B C:ANP3101 3.2 59.2 1.0 O1A C:ANP3101 3.4 59.2 1.0 CG C:ASN2875 3.5 35.6 1.0 CG C:ASP2889 3.6 45.9 1.0 PB C:ANP3101 3.6 59.2 1.0 CB C:ASP2889 3.8 45.9 1.0 O5' C:ANP3101 4.0 59.2 1.0 ND2 C:ASN2875 4.1 35.6 1.0 PA C:ANP3101 4.2 59.2 1.0 CE1 C:HIS2872 4.4 36.7 1.0 PG C:ANP3101 4.4 59.2 1.0 O3A C:ANP3101 4.4 59.2 1.0 NE2 C:HIS2872 4.5 36.7 1.0 O C:GLN2874 4.5 37.5 1.0 OD1 C:ASP2889 4.6 45.9 1.0 O1G C:ANP3101 4.7 59.2 1.0 O3' C:ANP3101 4.8 59.2 1.0 CB C:ASN2875 4.8 35.6 1.0 CA C:ASN2875 4.9 35.6 1.0 O1B C:ANP3101 4.9 59.2 1.0 C3' C:ANP3101 4.9 59.2 1.0 C C:GLN2874 5.0 37.5 1.0

C.Warren, N.P.Pavletich. Structure of the Human Atm Kinase and Mechanism of NBS1 Binding. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 35076389
DOI: 10.7554/ELIFE.74218