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Magnesium in PDB 7siy: Ccbl Tkb Domain in Complex with PZAP70 Peptide

Enzymatic activity of Ccbl Tkb Domain in Complex with PZAP70 Peptide

All present enzymatic activity of Ccbl Tkb Domain in Complex with PZAP70 Peptide:
2.3.2.27;

Protein crystallography data

The structure of Ccbl Tkb Domain in Complex with PZAP70 Peptide, PDB code: 7siy was solved by J.M.Murray, C.Yu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.66 / 1.48
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 123.519, 123.519, 56.598, 90, 90, 120
R / Rfree (%) 20.9 / 22.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ccbl Tkb Domain in Complex with PZAP70 Peptide (pdb code 7siy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ccbl Tkb Domain in Complex with PZAP70 Peptide, PDB code: 7siy:

Magnesium binding site 1 out of 1 in 7siy

Go back to Magnesium Binding Sites List in 7siy
Magnesium binding site 1 out of 1 in the Ccbl Tkb Domain in Complex with PZAP70 Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ccbl Tkb Domain in Complex with PZAP70 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:46.0
occ:1.00
OD1 A:ASP229 2.2 44.8 1.0
O A:TYR235 2.3 47.1 1.0
OE2 A:GLU240 2.4 43.9 1.0
OD1 A:ASN233 2.4 48.6 1.0
OE1 A:GLU240 2.5 44.7 1.0
CD A:GLU240 2.8 43.7 1.0
OG1 A:THR231 2.8 46.4 1.0
O A:HOH546 3.1 47.4 1.0
CG A:ASP229 3.3 45.8 1.0
CG A:ASN233 3.3 49.4 1.0
C A:TYR235 3.4 47.3 1.0
ND2 A:ASN233 3.8 51.0 1.0
CA A:ASP229 4.0 43.4 1.0
N A:TYR235 4.1 51.4 1.0
CB A:ASP229 4.1 44.4 1.0
OD2 A:ASP229 4.1 49.1 1.0
CB A:THR231 4.2 45.4 1.0
N A:THR231 4.2 43.2 1.0
N A:ASN233 4.2 49.9 1.0
CA A:TYR235 4.2 49.2 1.0
N A:ILE236 4.3 47.0 1.0
CG A:GLU240 4.3 41.9 1.0
CA A:ILE236 4.3 46.9 1.0
C A:ASP229 4.4 42.8 1.0
N A:CYS232 4.4 44.8 1.0
CA A:THR231 4.5 44.0 1.0
N A:LEU230 4.5 41.6 1.0
CB A:ASN233 4.5 50.1 1.0
CB A:TYR235 4.6 49.0 1.0
C A:THR231 4.6 45.0 1.0
CD1 A:ILE236 4.7 45.3 1.0
N A:ASP234 4.7 50.9 1.0
N A:SER237 4.7 45.7 1.0
CA A:ASN233 4.7 51.1 1.0
CG2 A:THR231 4.9 43.4 1.0
C A:ASN233 4.9 51.2 1.0
O A:ASP229 5.0 43.4 1.0

Reference:

J.M.Murray, C.Yu. Ccbl Tkb Domain in Complex with PZAP70 Peptide To Be Published.
Page generated: Thu Oct 3 08:45:43 2024

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