Magnesium in PDB 7spm: Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses).

The structure of Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses)., PDB code: 7spm was solved by A.R.Ward, C.D.Snow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.91 / 3.28
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	110.817, 80.174, 74.723, 90, 122.9, 90
R / Rfree (%)	20.1 / 25.3

The binding sites of Magnesium atom in the Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses). (pdb code 7spm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses)., PDB code: 7spm:

Magnesium binding site 1 out of 1 in the Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses).


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Replication Initiator Protein REPE54 and Cognate Dna Sequence with Terminal Three Prime Phosphates Chemically Crosslinked (30 Mg/Ml Edc, 12 Hours, 2 Doses). within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg301 b:38.2 occ:1.00 O C:HOH403 2.4 38.2 1.0 OD1 C:ASP81 2.5 101.7 1.0 O C:HOH404 2.6 38.2 1.0 O A:HOH102 2.7 38.2 1.0 OD2 C:ASP81 2.9 107.9 1.0 OE2 C:GLU77 2.9 133.5 1.0 CD C:GLU77 2.9 127.3 1.0 CG C:ASP81 3.0 113.3 1.0 CG C:GLU77 3.1 125.7 1.0 OE1 C:GLU77 3.5 116.9 1.0 OP2 A:DG14 4.1 124.1 1.0 N7 A:DG14 4.1 124.9 1.0 O C:GLU77 4.3 113.8 1.0 C8 A:DG14 4.4 124.8 1.0 CB C:ASP81 4.5 112.3 1.0 CB C:GLU77 4.6 122.9 1.0 CD C:LYS80 4.6 132.3 1.0 CE C:LYS80 4.7 125.9 1.0 N C:ASP81 4.9 117.4 1.0 C C:GLU77 4.9 118.7 1.0 OD2 C:ASP34 5.0 127.5 1.0

A.R.Ward, S.Dmytriw, A.Vajapayajula, C.D.Snow. Stabilizing Dna-Protein Co-Crystals Via in Crystallo Chemical Ligation of the Dna To Be Published.