Magnesium in PDB 7svu: Tnsbctd-Tnsc-Tniq Complex
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
11;
Binding sites:
The binding sites of Magnesium atom in the Tnsbctd-Tnsc-Tniq Complex
(pdb code 7svu). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 11 binding sites of Magnesium where determined in the
Tnsbctd-Tnsc-Tniq Complex, PDB code: 7svu:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 11 in 7svu
Go back to
Magnesium Binding Sites List in 7svu
Magnesium binding site 1 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg301
b:20.0
occ:1.00
|
OG1
|
A:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
A:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
A:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
A:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
A:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
A:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
A:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
A:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
A:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
A:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
A:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
A:THR67
|
3.9
|
49.0
|
1.0
|
N
|
A:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
A:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
A:ATP302
|
4.4
|
20.0
|
1.0
|
O3G
|
A:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
A:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
A:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
A:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 2 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 2 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg301
b:20.0
occ:1.00
|
OG1
|
B:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
B:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
B:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
B:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
B:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
B:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
B:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
B:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
B:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
B:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
B:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
B:THR67
|
3.9
|
49.0
|
1.0
|
N
|
B:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
B:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
B:ATP302
|
4.4
|
20.0
|
1.0
|
NH2
|
A:ARG189
|
4.6
|
49.0
|
1.0
|
O3G
|
B:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
B:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
B:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
B:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 3 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 3 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg301
b:20.0
occ:1.00
|
OG1
|
C:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
C:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
C:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
C:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
C:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
C:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
C:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
C:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
C:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
C:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
C:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
C:THR67
|
3.9
|
49.0
|
1.0
|
N
|
C:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
C:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
C:ATP302
|
4.4
|
20.0
|
1.0
|
NH2
|
B:ARG189
|
4.5
|
49.0
|
1.0
|
O3G
|
C:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
C:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
C:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
C:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 4 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 4 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg301
b:20.0
occ:1.00
|
OG1
|
D:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
D:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
D:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
D:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
D:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
D:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
D:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
D:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
D:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
D:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
D:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
D:THR67
|
3.9
|
49.0
|
1.0
|
N
|
D:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
D:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
D:ATP302
|
4.4
|
20.0
|
1.0
|
NH2
|
C:ARG189
|
4.6
|
49.0
|
1.0
|
O3G
|
D:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
D:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
D:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
D:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 5 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 5 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg301
b:20.0
occ:1.00
|
OG1
|
E:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
E:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
E:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
E:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
E:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
E:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
E:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
E:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
E:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
E:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
E:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
E:THR67
|
3.9
|
49.0
|
1.0
|
N
|
E:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
E:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
E:ATP302
|
4.4
|
20.0
|
1.0
|
NH2
|
D:ARG189
|
4.5
|
49.0
|
1.0
|
O3G
|
E:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
E:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
E:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
E:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 6 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 6 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg301
b:20.0
occ:1.00
|
OG1
|
F:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
F:ATP302
|
2.4
|
20.0
|
1.0
|
CB
|
F:THR67
|
2.6
|
49.0
|
1.0
|
O1A
|
F:ATP302
|
2.8
|
20.0
|
1.0
|
O2B
|
F:ATP302
|
2.8
|
20.0
|
1.0
|
CG2
|
F:THR67
|
3.2
|
49.0
|
1.0
|
PG
|
F:ATP302
|
3.7
|
20.0
|
1.0
|
O3B
|
F:ATP302
|
3.7
|
20.0
|
1.0
|
PB
|
F:ATP302
|
3.8
|
20.0
|
1.0
|
OD2
|
F:ASP144
|
3.8
|
49.0
|
1.0
|
PA
|
F:ATP302
|
3.9
|
20.0
|
1.0
|
CA
|
F:THR67
|
3.9
|
49.0
|
1.0
|
N
|
F:THR67
|
4.2
|
49.0
|
1.0
|
O2A
|
F:ATP302
|
4.3
|
20.0
|
1.0
|
O3A
|
F:ATP302
|
4.4
|
20.0
|
1.0
|
NH2
|
E:ARG189
|
4.6
|
49.0
|
1.0
|
O3G
|
F:ATP302
|
4.6
|
20.0
|
1.0
|
OD1
|
F:ASP144
|
4.6
|
49.0
|
1.0
|
CG
|
F:ASP144
|
4.6
|
49.0
|
1.0
|
O2G
|
F:ATP302
|
4.7
|
20.0
|
1.0
|
|
Magnesium binding site 7 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 7 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg301
b:20.0
occ:1.00
|
OG1
|
G:THR67
|
2.0
|
49.0
|
1.0
|
O2G
|
G:ATP302
|
2.3
|
20.0
|
1.0
|
O2B
|
G:ATP302
|
2.3
|
20.0
|
1.0
|
O1G
|
G:ATP302
|
2.4
|
20.0
|
1.0
|
PG
|
G:ATP302
|
2.6
|
20.0
|
1.0
|
PB
|
G:ATP302
|
2.7
|
20.0
|
1.0
|
O1B
|
G:ATP302
|
2.9
|
20.0
|
1.0
|
O3B
|
G:ATP302
|
3.0
|
20.0
|
1.0
|
CB
|
G:THR67
|
3.1
|
49.0
|
1.0
|
N
|
G:THR67
|
3.7
|
49.0
|
1.0
|
CA
|
G:THR67
|
3.9
|
49.0
|
1.0
|
O3G
|
G:ATP302
|
4.1
|
20.0
|
1.0
|
OD1
|
G:ASP144
|
4.2
|
49.0
|
1.0
|
CG2
|
G:THR67
|
4.2
|
49.0
|
1.0
|
O3A
|
G:ATP302
|
4.3
|
20.0
|
1.0
|
OE2
|
G:GLU145
|
4.3
|
49.0
|
1.0
|
OD2
|
G:ASP144
|
4.4
|
49.0
|
1.0
|
O1A
|
G:ATP302
|
4.7
|
20.0
|
1.0
|
CG
|
G:ASP144
|
4.7
|
49.0
|
1.0
|
C
|
G:LYS66
|
4.8
|
49.0
|
1.0
|
CB
|
G:LYS66
|
4.8
|
49.0
|
1.0
|
O
|
G:SER62
|
4.9
|
49.0
|
1.0
|
|
Magnesium binding site 8 out
of 11 in 7svu
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Magnesium Binding Sites List in 7svu
Magnesium binding site 8 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Mg301
b:20.0
occ:1.00
|
OG1
|
H:THR67
|
1.7
|
49.0
|
1.0
|
O1G
|
H:ATP302
|
2.2
|
20.0
|
1.0
|
O2B
|
H:ATP302
|
2.2
|
20.0
|
1.0
|
CB
|
H:THR67
|
2.9
|
49.0
|
1.0
|
O3B
|
H:ATP302
|
3.0
|
20.0
|
1.0
|
PB
|
H:ATP302
|
3.0
|
20.0
|
1.0
|
PG
|
H:ATP302
|
3.1
|
20.0
|
1.0
|
O3A
|
H:ATP302
|
3.4
|
20.0
|
1.0
|
O2G
|
H:ATP302
|
3.6
|
20.0
|
1.0
|
CG2
|
H:THR67
|
3.8
|
49.0
|
1.0
|
OD2
|
H:ASP144
|
3.9
|
49.0
|
1.0
|
CA
|
H:THR67
|
4.0
|
49.0
|
1.0
|
OD1
|
H:ASP144
|
4.1
|
49.0
|
1.0
|
N
|
H:THR67
|
4.1
|
49.0
|
1.0
|
CG
|
H:ASP144
|
4.4
|
49.0
|
1.0
|
O3G
|
H:ATP302
|
4.5
|
20.0
|
1.0
|
O1B
|
H:ATP302
|
4.5
|
20.0
|
1.0
|
NH2
|
G:ARG189
|
4.9
|
49.0
|
1.0
|
|
Magnesium binding site 9 out
of 11 in 7svu
Go back to
Magnesium Binding Sites List in 7svu
Magnesium binding site 9 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Mg301
b:20.0
occ:1.00
|
OG1
|
I:THR67
|
2.0
|
49.0
|
1.0
|
O2G
|
I:ATP302
|
2.3
|
20.0
|
1.0
|
O2B
|
I:ATP302
|
2.3
|
20.0
|
1.0
|
O1G
|
I:ATP302
|
2.4
|
20.0
|
1.0
|
PG
|
I:ATP302
|
2.6
|
20.0
|
1.0
|
PB
|
I:ATP302
|
2.7
|
20.0
|
1.0
|
O1B
|
I:ATP302
|
2.9
|
20.0
|
1.0
|
O3B
|
I:ATP302
|
3.0
|
20.0
|
1.0
|
CB
|
I:THR67
|
3.1
|
49.0
|
1.0
|
N
|
I:THR67
|
3.7
|
49.0
|
1.0
|
CA
|
I:THR67
|
3.9
|
49.0
|
1.0
|
O3G
|
I:ATP302
|
4.1
|
20.0
|
1.0
|
OD1
|
I:ASP144
|
4.2
|
49.0
|
1.0
|
CG2
|
I:THR67
|
4.2
|
49.0
|
1.0
|
O3A
|
I:ATP302
|
4.3
|
20.0
|
1.0
|
OE2
|
I:GLU145
|
4.3
|
49.0
|
1.0
|
OD2
|
I:ASP144
|
4.4
|
49.0
|
1.0
|
O1A
|
I:ATP302
|
4.7
|
20.0
|
1.0
|
CG
|
I:ASP144
|
4.7
|
49.0
|
1.0
|
C
|
I:LYS66
|
4.8
|
49.0
|
1.0
|
CB
|
I:LYS66
|
4.8
|
49.0
|
1.0
|
O
|
I:SER62
|
4.9
|
49.0
|
1.0
|
|
Magnesium binding site 10 out
of 11 in 7svu
Go back to
Magnesium Binding Sites List in 7svu
Magnesium binding site 10 out
of 11 in the Tnsbctd-Tnsc-Tniq Complex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Tnsbctd-Tnsc-Tniq Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Mg301
b:20.0
occ:1.00
|
OG1
|
J:THR67
|
1.7
|
49.0
|
1.0
|
O2B
|
J:ATP302
|
1.8
|
20.0
|
1.0
|
O2G
|
J:ATP302
|
2.3
|
20.0
|
1.0
|
CB
|
J:THR67
|
2.9
|
49.0
|
1.0
|
PB
|
J:ATP302
|
3.1
|
20.0
|
1.0
|
PG
|
J:ATP302
|
3.5
|
20.0
|
1.0
|
O3B
|
J:ATP302
|
3.5
|
20.0
|
1.0
|
O1A
|
J:ATP302
|
3.7
|
20.0
|
1.0
|
CG2
|
J:THR67
|
3.8
|
49.0
|
1.0
|
OD2
|
J:ASP144
|
3.9
|
49.0
|
1.0
|
CA
|
J:THR67
|
4.0
|
49.0
|
1.0
|
O3A
|
J:ATP302
|
4.0
|
20.0
|
1.0
|
OD1
|
J:ASP144
|
4.1
|
49.0
|
1.0
|
N
|
J:THR67
|
4.1
|
49.0
|
1.0
|
O1B
|
J:ATP302
|
4.2
|
20.0
|
1.0
|
O1G
|
J:ATP302
|
4.3
|
20.0
|
1.0
|
CG
|
J:ASP144
|
4.4
|
49.0
|
1.0
|
PA
|
J:ATP302
|
4.5
|
20.0
|
1.0
|
O3G
|
J:ATP302
|
4.6
|
20.0
|
1.0
|
NH2
|
I:ARG189
|
4.9
|
49.0
|
1.0
|
|
Reference:
J.Park,
A.W.T.Tsai,
E.H.Kellogg.
Structural Basis of Transposase Recruitment and Donor-Dna Integration For Rna-Guided Dna Transposition Systems To Be Published.
Page generated: Thu Oct 3 08:54:48 2024
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