Magnesium in PDB 7sx8: T-Plastin-F-Actin Complex, Parallel Bundled State

The binding sites of Magnesium atom in the T-Plastin-F-Actin Complex, Parallel Bundled State (pdb code 7sx8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the T-Plastin-F-Actin Complex, Parallel Bundled State, PDB code: 7sx8:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:1000.0 occ:1.00 O2B C:ADP401 2.1 1000.0 1.0 CG2 C:VAL339 2.7 1000.0 1.0 PB C:ADP401 2.7 1000.0 1.0 O3B C:ADP401 2.9 1000.0 1.0 CG1 C:VAL339 3.2 1000.0 1.0 CB C:VAL339 3.2 1000.0 1.0 O1B C:ADP401 3.4 1000.0 1.0 OD2 C:ASP11 3.7 1000.0 1.0 OD1 C:ASP11 3.8 1000.0 1.0 OE1 C:GLN137 4.0 1000.0 1.0 O3A C:ADP401 4.2 1000.0 1.0 CG C:ASP11 4.2 1000.0 1.0 CD C:GLN137 4.3 1000.0 1.0 CA C:VAL339 4.7 1000.0 1.0 NE2 C:GLN137 4.8 1000.0 1.0 CG C:GLN137 4.9 1000.0 1.0 CB C:GLN137 5.0 1000.0 1.0

Magnesium binding site 2 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:543.1 occ:1.00 O2B B:ADP401 2.8 372.8 1.0 OE1 B:GLN137 3.2 363.0 1.0 O2A B:ADP401 3.7 372.8 1.0 CD B:GLN137 3.9 363.0 1.0 OD2 B:ASP11 4.1 699.6 1.0 NE2 B:GLN137 4.2 363.0 1.0 PB B:ADP401 4.3 372.8 1.0 CG2 B:VAL339 4.3 273.3 1.0 OD1 B:ASP154 4.4 580.0 1.0 CA B:GLY156 4.4 564.2 1.0 NZ B:LYS18 4.7 622.0 1.0 O3A B:ADP401 4.7 372.8 1.0 PA B:ADP401 4.8 372.8 1.0 CG B:ASP11 4.8 699.6 1.0 OD1 B:ASP11 4.9 699.6 1.0 CB B:VAL339 4.9 273.3 1.0 N B:GLY156 5.0 564.2 1.0

Magnesium binding site 3 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:1000.0 occ:1.00 O2B A:ADP401 2.2 709.1 1.0 O1B A:ADP401 2.3 709.1 1.0 PB A:ADP401 2.6 709.1 1.0 OE1 A:GLN137 3.1 1000.0 1.0 O3B A:ADP401 3.6 709.1 1.0 CD A:GLN137 3.7 1000.0 1.0 O A:ASN12 3.7 1000.0 1.0 NE2 A:GLN137 3.8 1000.0 1.0 OD1 A:ASP11 3.9 1000.0 1.0 O3A A:ADP401 3.9 709.1 1.0 OD2 A:ASP11 4.0 1000.0 1.0 NZ A:LYS18 4.3 1000.0 1.0 CG A:ASP11 4.3 1000.0 1.0 CA A:GLY13 4.3 1000.0 1.0 OD1 A:ASP154 4.4 1000.0 1.0 C A:ASN12 4.6 1000.0 1.0 CA A:GLY156 4.7 1000.0 1.0 CG A:GLN137 4.8 1000.0 1.0 N A:GLY13 4.9 1000.0 1.0 CG2 A:VAL339 4.9 1000.0 1.0

Magnesium binding site 4 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg402 b:1000.0 occ:1.00 O3B H:ADP401 2.1 930.2 1.0 OD2 H:ASP11 3.5 991.6 1.0 PB H:ADP401 3.5 930.2 1.0 O2B H:ADP401 4.1 930.2 1.0 CD H:GLN137 4.1 1000.0 1.0 O2A H:ADP401 4.2 930.2 1.0 OE1 H:GLN137 4.2 1000.0 1.0 CG2 H:VAL339 4.2 997.4 1.0 OD1 H:ASP11 4.3 991.6 1.0 CG H:ASP11 4.3 991.6 1.0 OD2 H:ASP154 4.3 1000.0 1.0 O3A H:ADP401 4.3 930.2 1.0 NZ H:LYS18 4.4 1000.0 1.0 CG H:GLN137 4.5 1000.0 1.0 NE2 H:GLN137 4.5 1000.0 1.0 O1B H:ADP401 4.5 930.2 1.0 OD1 H:ASP154 4.6 1000.0 1.0 CB H:VAL339 4.7 997.4 1.0 CA H:GLY156 4.7 1000.0 1.0 CG H:ASP154 4.8 1000.0 1.0 PA H:ADP401 4.9 930.2 1.0 CB H:GLN137 5.0 1000.0 1.0 CG1 H:VAL339 5.0 997.4 1.0

Magnesium binding site 5 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg402 b:543.1 occ:1.00 O2B G:ADP401 2.1 426.4 1.0 PB G:ADP401 3.2 426.4 1.0 O3B G:ADP401 3.3 426.4 1.0 OE1 G:GLN137 3.7 403.5 1.0 CD G:GLN137 3.9 403.5 1.0 OD2 G:ASP11 4.1 369.6 1.0 OD1 G:ASP154 4.1 297.2 1.0 NE2 G:GLN137 4.1 403.5 1.0 O3A G:ADP401 4.2 426.4 1.0 O1B G:ADP401 4.3 426.4 1.0 OD2 G:ASP154 4.3 297.2 1.0 CA G:GLY156 4.4 352.5 1.0 CG2 G:VAL339 4.4 214.4 1.0 O2A G:ADP401 4.5 426.4 1.0 CG G:ASP154 4.5 297.2 1.0 CG G:GLN137 4.6 403.5 1.0 OD1 G:ASP11 4.6 369.6 1.0 CG G:ASP11 4.8 369.6 1.0 N G:GLY156 4.8 352.5 1.0 NZ G:LYS18 4.9 375.5 1.0 CB G:GLN137 4.9 403.5 1.0 PA G:ADP401 5.0 426.4 1.0

Magnesium binding site 6 out of 6 in the T-Plastin-F-Actin Complex, Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of T-Plastin-F-Actin Complex, Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:662.5 occ:1.00 O3B E:ADP401 2.0 697.1 1.0 PB E:ADP401 3.1 697.1 1.0 O2B E:ADP401 3.4 697.1 1.0 O2A E:ADP401 3.6 697.1 1.0 O3A E:ADP401 3.6 697.1 1.0 PA E:ADP401 4.1 697.1 1.0 OE1 E:GLN137 4.2 668.5 1.0 OD1 E:ASP154 4.2 635.9 1.0 CA E:GLY156 4.3 795.3 1.0 CD E:GLN137 4.4 668.5 1.0 NZ E:LYS18 4.4 1000.0 1.0 OD2 E:ASP11 4.4 1000.0 1.0 O1B E:ADP401 4.4 697.1 1.0 NE2 E:GLN137 4.6 668.5 1.0 OD1 E:ASP11 4.8 1000.0 1.0 CA E:GLY13 4.8 1000.0 1.0 O1A E:ADP401 4.9 697.1 1.0 CG2 E:VAL339 5.0 666.7 1.0

L.Mei, M.J.Reynolds, D.Garbett, R.Gong, T.Meyer, G.M.Alushin. Structural Mechanism For Bidirectional Actin Cross-Linking By T-Plastin. Proc.Natl.Acad.Sci.Usa V. 119 70119 2022.
ISSN: ESSN 1091-6490
PubMed: 36067297
DOI: 10.1073/PNAS.2205370119