Magnesium in PDB 7sx9: T-Plastin-F-Actin Complex, Anti-Parallel Bundled State

The binding sites of Magnesium atom in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State (pdb code 7sx9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State, PDB code: 7sx9:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:777.0 occ:1.00 O3B B:ADP401 1.8 880.7 1.0 O2B B:ADP401 1.9 880.7 1.0 PB B:ADP401 2.2 880.7 1.0 O3A B:ADP401 2.9 880.7 1.0 O1B B:ADP401 3.6 880.7 1.0 CA B:GLY156 3.7 690.1 1.0 CA B:GLY13 3.8 749.0 1.0 O2A B:ADP401 3.8 880.7 1.0 PA B:ADP401 3.9 880.7 1.0 N B:ASP157 4.0 827.4 1.0 N B:SER14 4.2 854.4 1.0 C B:GLY156 4.4 690.1 1.0 NZ B:LYS18 4.5 611.1 1.0 C B:GLY13 4.6 749.0 1.0 O1A B:ADP401 4.6 880.7 1.0 N B:GLY156 4.6 690.1 1.0 OE1 B:GLN137 4.8 204.3 1.0 N B:GLY13 4.9 749.0 1.0

Magnesium binding site 2 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:1000.0 occ:1.00 O2B A:ADP401 1.8 1000.0 1.0 O3B A:ADP401 1.9 1000.0 1.0 PB A:ADP401 2.1 1000.0 1.0 O3A A:ADP401 2.9 1000.0 1.0 O1B A:ADP401 3.5 1000.0 1.0 CA A:GLY156 3.7 1000.0 1.0 CA A:GLY13 3.7 1000.0 1.0 N A:ASP157 3.9 1000.0 1.0 N A:SER14 4.0 1000.0 1.0 PA A:ADP401 4.2 1000.0 1.0 C A:GLY156 4.4 1000.0 1.0 O1A A:ADP401 4.4 1000.0 1.0 C A:GLY13 4.5 1000.0 1.0 NZ A:LYS18 4.5 1000.0 1.0 N A:GLY156 4.6 1000.0 1.0 O2A A:ADP401 4.7 1000.0 1.0 N A:GLY13 4.9 1000.0 1.0

Magnesium binding site 3 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:699.6 occ:1.00 O3B C:ADP401 1.8 613.1 1.0 O2B C:ADP401 1.9 613.1 1.0 PB C:ADP401 2.1 613.1 1.0 O3A C:ADP401 2.9 613.1 1.0 O1B C:ADP401 3.5 613.1 1.0 CA C:GLY156 3.7 743.0 1.0 CA C:GLY13 3.8 486.2 1.0 O2A C:ADP401 3.8 613.1 1.0 PA C:ADP401 3.9 613.1 1.0 N C:ASP157 4.0 732.0 1.0 N C:SER14 4.1 565.9 1.0 C C:GLY156 4.4 743.0 1.0 NZ C:LYS18 4.4 506.6 1.0 C C:GLY13 4.5 486.2 1.0 N C:GLY156 4.6 743.0 1.0 O1A C:ADP401 4.6 613.1 1.0 N C:GLY13 5.0 486.2 1.0 OE1 C:GLN137 5.0 660.7 1.0

Magnesium binding site 4 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg402 b:799.5 occ:1.00 O1B G:ADP401 1.8 824.4 1.0 O2B G:ADP401 1.9 824.4 1.0 PB G:ADP401 2.1 824.4 1.0 O3A G:ADP401 2.8 824.4 1.0 O3B G:ADP401 3.5 824.4 1.0 CA G:GLY156 3.6 675.9 1.0 O1A G:ADP401 3.7 824.4 1.0 PA G:ADP401 3.8 824.4 1.0 CA G:GLY13 3.8 880.1 1.0 N G:ASP157 3.9 785.4 1.0 N G:SER14 4.1 933.3 1.0 C G:GLY156 4.3 675.9 1.0 N G:GLY156 4.5 675.9 1.0 O2A G:ADP401 4.5 824.4 1.0 C G:GLY13 4.6 880.1 1.0 NZ G:LYS18 4.6 567.0 1.0 OE1 G:GLN137 4.9 387.7 1.0

Magnesium binding site 5 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:1000.0 occ:1.00 O1B E:ADP401 1.8 1000.0 1.0 O3B E:ADP401 1.9 1000.0 1.0 PB E:ADP401 2.1 1000.0 1.0 O3A E:ADP401 2.8 1000.0 1.0 O2B E:ADP401 3.5 1000.0 1.0 CA E:GLY156 3.5 1000.0 1.0 N E:ASP157 3.7 1000.0 1.0 CA E:GLY13 3.8 1000.0 1.0 N E:SER14 4.0 1000.0 1.0 PA E:ADP401 4.1 1000.0 1.0 C E:GLY156 4.2 1000.0 1.0 O2A E:ADP401 4.3 1000.0 1.0 N E:GLY156 4.4 1000.0 1.0 C E:GLY13 4.5 1000.0 1.0 NZ E:LYS18 4.6 1000.0 1.0 O1A E:ADP401 4.6 1000.0 1.0 CA E:ASP157 4.9 1000.0 1.0

Magnesium binding site 6 out of 6 in the T-Plastin-F-Actin Complex, Anti-Parallel Bundled State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of T-Plastin-F-Actin Complex, Anti-Parallel Bundled State within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg402 b:497.2 occ:1.00 O1B H:ADP401 1.8 510.4 1.0 O2B H:ADP401 1.9 510.4 1.0 PB H:ADP401 2.1 510.4 1.0 O3A H:ADP401 2.8 510.4 1.0 O3B H:ADP401 3.5 510.4 1.0 CA H:GLY156 3.6 524.4 1.0 O1A H:ADP401 3.7 510.4 1.0 CA H:GLY13 3.8 457.0 1.0 PA H:ADP401 3.8 510.4 1.0 N H:ASP157 3.9 584.9 1.0 N H:SER14 4.0 540.9 1.0 C H:GLY156 4.3 524.4 1.0 NZ H:LYS18 4.4 385.1 1.0 C H:GLY13 4.5 457.0 1.0 N H:GLY156 4.5 524.4 1.0 O2A H:ADP401 4.5 510.4 1.0 OE1 H:GLN137 4.9 684.7 1.0 N H:GLY13 5.0 457.0 1.0

L.Mei, M.J.Reynolds, D.Garbett, R.Gong, T.Meyer, G.M.Alushin. Structural Mechanism For Bidirectional Actin Cross-Linking By T-Plastin. Proc.Natl.Acad.Sci.Usa V. 119 70119 2022.
ISSN: ESSN 1091-6490
PubMed: 36067297
DOI: 10.1073/PNAS.2205370119