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Magnesium in PDB 7tbr: Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776

Protein crystallography data

The structure of Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776, PDB code: 7tbr was solved by L.Pellizza, S.Klinke, M.Aran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.79 / 1.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 84.78, 37.56, 48.53, 90, 118.15, 90
R / Rfree (%) 19.1 / 22.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776 (pdb code 7tbr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776, PDB code: 7tbr:

Magnesium binding site 1 out of 1 in 7tbr

Go back to Magnesium Binding Sites List in 7tbr
Magnesium binding site 1 out of 1 in the Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:14.9
occ:1.00
OE2 A:GLU26 2.2 21.6 1.0
O A:HOH355 2.3 20.3 1.0
OD1 A:ASP19 2.4 20.1 1.0
O A:HOH396 2.4 32.7 1.0
O A:LEU21 2.4 17.2 1.0
OD2 A:ASP16 2.5 12.7 1.0
CD A:GLU26 3.4 20.8 1.0
CG A:ASP16 3.5 11.3 1.0
CG A:ASP19 3.6 15.0 1.0
C A:LEU21 3.6 14.3 1.0
CB A:ASP16 3.9 10.8 1.0
CA A:ASP19 3.9 10.6 1.0
N A:LEU21 4.1 11.7 1.0
CG A:GLU26 4.2 18.0 1.0
CA A:LEU21 4.3 12.3 1.0
CB A:ASP19 4.3 12.1 1.0
O A:ASP16 4.3 11.1 1.0
OE1 A:GLU26 4.4 23.1 1.0
CB A:LEU21 4.4 12.1 1.0
C A:ASP19 4.4 11.0 1.0
OD2 A:ASP19 4.5 15.9 1.0
OD1 A:ASP16 4.5 10.4 1.0
O A:HOH410 4.7 31.1 1.0
N A:THR22 4.7 14.8 1.0
C A:THR22 4.7 17.7 1.0
N A:LEU20 4.7 10.7 1.0
O A:THR22 4.9 16.9 1.0
CA A:THR22 4.9 16.8 1.0
N A:ASP19 4.9 11.0 1.0
O A:ASP19 5.0 12.3 1.0
N A:PRO23 5.0 18.7 1.0

Reference:

L.Pellizza, S.Klinke, M.Aran. Crystal Structure of the Tpm Domain From the Rhodothermus Marinus Protein RHOM172_1776 To Be Published.
Page generated: Thu Oct 3 09:04:30 2024

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