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Magnesium in PDB 7tcy: The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I

Enzymatic activity of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I

All present enzymatic activity of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I:
2.7.10.2;

Protein crystallography data

The structure of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I, PDB code: 7tcy was solved by S.Nawarathnage, R.D.Bunn, C.Stewart, T.Doukov, D.J.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.03 / 1.54
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.734, 88.07, 26.497, 90, 90, 90
R / Rfree (%) 18.9 / 21.4

Other elements in 7tcy:

The structure of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I (pdb code 7tcy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I, PDB code: 7tcy:

Magnesium binding site 1 out of 1 in 7tcy

Go back to Magnesium Binding Sites List in 7tcy
Magnesium binding site 1 out of 1 in the The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg703

b:40.3
occ:1.00
O1 A:PO4702 2.8 54.0 1.0
HE1 A:HIS607 3.0 55.9 1.0
O4 A:PO4702 3.3 57.1 1.0
P A:PO4702 3.3 65.3 1.0
HD1 A:HIS607 3.4 44.1 1.0
O2 A:PO4702 3.4 38.7 1.0
OE1 A:GLN611 3.5 36.8 1.0
CE1 A:HIS607 3.6 46.5 1.0
ND1 A:HIS607 3.8 36.7 1.0
HE22 A:GLN611 4.0 29.7 1.0
CD A:GLN611 4.4 29.2 1.0
NE2 A:GLN611 4.5 24.7 1.0
O3 A:PO4702 4.8 36.7 1.0
NE2 A:HIS607 4.9 36.8 1.0
HE22 A:GLN608 5.0 39.2 1.0

Reference:

S.Nawarathnage, R.D.Bunn, C.Stewart, T.Doukov, J.D.Moody. The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase-1 To Be Published.
Page generated: Thu Oct 3 09:05:06 2024

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