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Magnesium in PDB 7tja: Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata

Protein crystallography data

The structure of Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata, PDB code: 7tja was solved by P.D.Jeffrey, L.C.Spangler, G.D.Scholes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.38 / 1.96
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 88.216, 132.478, 93.892, 90, 117.35, 90
R / Rfree (%) 17.6 / 24

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata (pdb code 7tja). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata, PDB code: 7tja:

Magnesium binding site 1 out of 1 in 7tja

Go back to Magnesium Binding Sites List in 7tja
Magnesium binding site 1 out of 1 in the Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Light Harvesting Complex PE545 From Proteomonas Sulcata within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg204

b:67.6
occ:1.00
O K:HOH238 2.2 55.4 1.0
OD2 K:ASP60 2.2 27.4 1.0
O J:SER46 2.4 22.5 1.0
O J:HOH409 2.5 27.0 1.0
O K:HOH206 2.5 42.6 1.0
CG K:ASP60 3.0 34.8 1.0
C J:SER46 3.2 21.5 1.0
CA J:ASN47 3.6 22.2 1.0
OD1 K:ASP60 3.7 33.6 1.0
CB K:ASP60 3.7 27.5 1.0
N J:ASN47 3.7 20.6 1.0
O K:HOH224 3.7 41.2 1.0
C J:ASN47 3.8 22.0 1.0
N J:SER49 3.8 19.2 1.0
N J:ALA48 3.9 21.2 1.0
NZ J:LYS150 3.9 24.8 1.0
CB J:SER49 4.0 31.3 1.0
CA J:SER46 4.2 21.5 1.0
OG J:SER49 4.3 35.8 1.0
O J:VAL45 4.3 27.7 1.0
O J:ASN47 4.5 19.9 1.0
O J:HOH342 4.5 29.6 1.0
CA J:SER49 4.6 19.9 1.0
C J:ALA48 4.8 22.8 1.0
CA J:ALA48 4.8 26.4 1.0
O J:HOH397 5.0 36.9 1.0
N J:CYS50 5.0 20.4 1.0

Reference:

L.C.Spangler, M.Yu, P.D.Jeffrey, G.D.Scholes. Controllable Phycobilin Modification: An Alternative Photoacclimation Response in Cryptophyte Algae. Acs Cent.Sci. V. 8 340 2022.
ISSN: ESSN 2374-7951
PubMed: 35350600
DOI: 10.1021/ACSCENTSCI.1C01209
Page generated: Thu Oct 3 09:18:56 2024

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