Magnesium in PDB 7tqd: Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex (pdb code 7tqd). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex, PDB code: 7tqd:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7tqd

Go back to Magnesium Binding Sites List in 7tqd
Magnesium binding site 1 out of 2 in the Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:55.4
occ:1.00
OD2 C:ASP69 2.0 93.7 1.0
O1A C:ATP404 2.8 99.2 1.0
OD1 C:ASP71 2.9 100.2 1.0
CG C:ASP69 3.1 99.5 1.0
OD2 C:ASP121 3.2 96.4 1.0
OD1 C:ASP69 3.5 99.9 1.0
CG C:ASP71 3.9 96.0 1.0
MG C:MG403 3.9 89.0 1.0
OD2 C:ASP71 4.1 96.7 1.0
PA C:ATP404 4.1 105.7 1.0
CG C:ASP121 4.1 99.2 1.0
CB C:ASP121 4.3 87.2 1.0
CB C:ASP69 4.4 93.5 1.0
O2A C:ATP404 4.5 89.4 1.0
O5' C:ATP404 4.9 104.7 1.0
C5' C:ATP404 5.0 92.5 1.0

Magnesium binding site 2 out of 2 in 7tqd

Go back to Magnesium Binding Sites List in 7tqd
Magnesium binding site 2 out of 2 in the Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Enterobacter Cloacae CAP2-CDND02 2:1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg403

b:89.0
occ:1.00
O2B C:ATP404 2.0 103.2 1.0
OD2 C:ASP71 2.3 96.7 1.0
O1G C:ATP404 2.7 103.7 1.0
O1A C:ATP404 3.0 99.2 1.0
OD2 C:ASP69 3.2 93.7 1.0
PB C:ATP404 3.3 99.0 1.0
CG C:ASP71 3.3 96.0 1.0
O3B C:ATP404 3.5 103.8 1.0
OD1 C:ASP71 3.7 100.2 1.0
PG C:ATP404 3.7 108.0 1.0
CG C:ASP69 3.9 99.5 1.0
MG C:MG402 3.9 55.4 1.0
O3A C:ATP404 3.9 99.4 1.0
PA C:ATP404 4.0 105.7 1.0
OG C:SER53 4.1 87.2 1.0
O C:ASP69 4.1 97.2 1.0
CB C:ASP69 4.2 93.5 1.0
O1B C:ATP404 4.4 90.6 1.0
N C:SER53 4.4 77.7 1.0
C C:ASP69 4.6 89.5 1.0
CB C:ASP71 4.6 86.5 1.0
C5' C:ATP404 4.7 92.5 1.0
O3G C:ATP404 4.7 101.7 1.0
O2G C:ATP404 4.7 89.4 1.0
OD1 C:ASP69 4.8 99.9 1.0
CA C:GLY52 4.9 83.4 1.0
O5' C:ATP404 4.9 104.7 1.0
CB C:SER53 4.9 78.6 1.0

Reference:

H.E.Ledvina, Q.Ye, Y.Gu, Y.Quan, R.K.Lau, H.Zhou, K.D.Corbett, A.T.Whiteley. A Standalone E1-E2 Fusion Protein Catalyzes Ubiquitin-Like Transfer in Bacterial Antiviral Immunity To Be Published.
Page generated: Thu Apr 6 23:09:48 2023

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