Magnesium in PDB 7tqy: CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule

The structure of CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule also contains other interesting chemical elements:

Fluorine	(F)	3 atoms
Aluminium	(Al)	1 atom

The binding sites of Magnesium atom in the CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule (pdb code 7tqy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule, PDB code: 7tqy:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule within 5.0Å range: probe atom residue distance (Å) B Occ K:Mg802 b:60.3 occ:1.00 OG K:SER301 2.0 63.5 1.0 F3 K:AF3800 2.1 73.0 1.0 O2B K:ADP801 2.1 75.5 1.0 OG1 K:THR192 2.3 66.0 1.0 CB K:SER301 2.6 61.2 1.0 N K:SER301 3.4 62.3 1.0 PB K:ADP801 3.5 72.2 1.0 CB K:THR192 3.6 63.2 1.0 CA K:SER301 3.6 57.4 1.0 AL K:AF3800 3.7 66.9 1.0 O1B K:ADP801 4.0 68.2 1.0 OD2 K:ASP333 4.2 69.8 1.0 O2A K:ADP801 4.3 73.6 1.0 O3B K:ADP801 4.4 73.1 1.0 CG2 K:THR192 4.4 68.9 1.0 N K:THR192 4.5 63.4 1.0 O3A K:ADP801 4.5 70.8 1.0 C K:SER300 4.6 70.1 1.0 OD1 K:ASP333 4.6 70.2 1.0 CA K:THR192 4.6 61.7 1.0 C K:SER301 4.6 61.9 1.0 O K:SER301 4.7 66.1 1.0 F1 K:AF3800 4.7 71.7 1.0 F2 K:AF3800 4.7 70.9 1.0 CG K:ASP333 4.8 68.7 1.0 PA K:ADP801 4.8 68.5 1.0 NH2 K:ARG289 5.0 64.4 1.0 O K:THR299 5.0 76.8 1.0 CA K:SER300 5.0 69.0 1.0

Magnesium binding site 2 out of 2 in the CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of CAKIP3[2-482] - Adp-Alfx in Complex with A Microtubule within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:32.1 occ:1.00 O3G A:GTP501 1.9 40.2 1.0 OE2 A:GLU71 2.6 60.1 1.0 PG A:GTP501 3.3 35.7 1.0 O1G A:GTP501 3.6 46.1 1.0 O1B A:GTP501 3.8 45.9 1.0 CD A:GLU71 3.8 60.1 1.0 CB A:GLN11 4.2 31.5 1.0 O3B A:GTP501 4.2 32.7 1.0 O3A A:GTP501 4.3 18.3 1.0 O2G A:GTP501 4.3 30.3 1.0 CB A:GLU71 4.3 50.9 1.0 O A:ASP69 4.4 56.4 1.0 OE1 A:GLN11 4.4 44.2 1.0 PB A:GTP501 4.4 37.7 1.0 N A:GLN11 4.5 36.1 1.0 NZ B:LYS252 4.6 39.4 1.0 CG A:GLU71 4.6 53.0 1.0 OE1 A:GLU71 4.7 62.8 1.0 CA A:GLN11 4.9 30.8 1.0 CG2 A:VAL74 4.9 47.4 1.0 O1A A:GTP501 5.0 50.9 1.0 CD A:GLN11 5.0 36.9 1.0

B.Hunter, M.P.M.H.Benoit, A.B.Asenjo, C.Doubleday, D.Trofimova, C.Frazer, I.Shoukat, H.Sosa, J.S.Allingham. Kinesin-8-Specific Loop-2 Controls the Dual Activities of the Motor Domain According to Tubulin Protofilament Shape. Nat Commun V. 13 4198 2022.
ISSN: ESSN 2041-1723
PubMed: 35859148
DOI: 10.1038/S41467-022-31794-3