Magnesium in PDB 7txu: Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)

Enzymatic activity of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)

Other elements in 7txu:

Magnesium Binding Sites:

Magnesium binding site 1 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 1 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg901 b:32.3 occ:1.00 OD2 A:ASP431 2.4 17.5 1.0 O1G A:ATP905 2.7 40.5 1.0 OE1 A:GLU450 2.9 16.9 1.0 CG A:ASP431 3.5 17.5 1.0 O3A A:ATP905 3.5 40.5 1.0 OD1 A:ASP431 3.9 17.5 1.0 CD A:GLU450 4.0 16.9 1.0 PG A:ATP905 4.0 40.5 1.0 O5' A:ATP905 4.1 40.5 1.0 PA A:ATP905 4.2 40.5 1.0 O1A A:ATP905 4.4 40.5 1.0 ND2 A:ASN452 4.4 16.6 1.0 O3B A:ATP905 4.5 40.5 1.0 NH2 A:ARG309 4.5 30.6 1.0 PB A:ATP905 4.6 40.5 1.0 CB A:ASP431 4.7 17.5 1.0 CB A:GLU450 4.8 16.9 1.0 OE2 A:GLU450 4.8 16.9 1.0 CG A:GLU450 4.8 16.9 1.0 O2G A:ATP905 4.8 40.5 1.0 O3G A:ATP905 4.9 40.5 1.0 NH2 A:ARG323 4.9 23.5 1.0

Magnesium binding site 2 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 2 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:36.4 occ:1.00 O3G A:ATP906 2.5 29.6 1.0 NE2 A:HIS586 2.6 46.0 1.0 CE1 A:HIS586 3.4 46.0 1.0 CD2 A:HIS586 3.7 46.0 1.0 PG A:ATP906 3.9 29.6 1.0 O2G A:ATP906 4.3 29.6 1.0 O3B A:ATP906 4.6 29.6 1.0 ND1 A:HIS586 4.6 46.0 1.0 O A:THR496 4.6 15.5 1.0 CG A:HIS586 4.7 46.0 1.0 NZ A:LYS499 4.7 15.7 1.0

Magnesium binding site 3 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 3 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg903 b:21.6 occ:1.00 OE2 A:GLU558 1.8 18.4 1.0 O1G A:ATP906 1.9 29.6 1.0 OG1 A:THR500 2.1 18.9 1.0 O2B A:ATP906 2.4 29.6 1.0 OG1 A:THR522 2.5 32.0 1.0 CD A:GLU558 2.7 18.4 1.0 OE1 A:GLU558 2.8 18.4 1.0 CG2 A:THR522 3.0 32.0 1.0 CB A:THR522 3.3 32.0 1.0 PG A:ATP906 3.4 29.6 1.0 CB A:THR500 3.5 18.9 1.0 PB A:ATP906 3.7 29.6 1.0 O1B A:ATP906 4.1 29.6 1.0 O3B A:ATP906 4.1 29.6 1.0 N A:THR522 4.1 32.0 1.0 N A:THR500 4.1 18.9 1.0 CG A:GLU558 4.2 18.4 1.0 CA A:THR500 4.2 18.9 1.0 O3G A:ATP906 4.3 29.6 1.0 O2G A:ATP906 4.3 29.6 1.0 CA A:THR522 4.3 32.0 1.0 O1A A:ATP906 4.4 29.6 1.0 CG2 A:THR500 4.4 18.9 1.0 CB A:LYS499 4.8 15.7 1.0 CE A:LYS499 4.8 15.7 1.0

Magnesium binding site 4 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 4 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg901 b:29.6 occ:1.00 OD2 B:ASP431 2.4 17.6 1.0 O1G B:ATP905 2.7 42.0 1.0 OE1 B:GLU450 2.9 17.0 1.0 CG B:ASP431 3.5 17.6 1.0 O3A B:ATP905 3.5 42.0 1.0 OD1 B:ASP431 3.9 17.6 1.0 CD B:GLU450 4.0 17.0 1.0 PG B:ATP905 4.0 42.0 1.0 O5' B:ATP905 4.1 42.0 1.0 PA B:ATP905 4.2 42.0 1.0 O1A B:ATP905 4.4 42.0 1.0 ND2 B:ASN452 4.4 16.8 1.0 O3B B:ATP905 4.5 42.0 1.0 NH2 B:ARG309 4.5 30.6 1.0 PB B:ATP905 4.6 42.0 1.0 CB B:ASP431 4.7 17.6 1.0 CB B:GLU450 4.8 17.0 1.0 OE2 B:GLU450 4.8 17.0 1.0 CG B:GLU450 4.8 17.0 1.0 O2G B:ATP905 4.8 42.0 1.0 O3G B:ATP905 4.9 42.0 1.0 NH2 B:ARG323 4.9 23.9 1.0

Magnesium binding site 5 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 5 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:38.0 occ:1.00 O3G B:ATP906 2.5 29.7 1.0 NE2 B:HIS586 2.6 47.9 1.0 CE1 B:HIS586 3.4 47.9 1.0 CD2 B:HIS586 3.7 47.9 1.0 PG B:ATP906 3.9 29.7 1.0 O2G B:ATP906 4.3 29.7 1.0 O3B B:ATP906 4.6 29.7 1.0 ND1 B:HIS586 4.6 47.9 1.0 O B:THR496 4.6 17.2 1.0 CG B:HIS586 4.7 47.9 1.0 NZ B:LYS499 4.7 16.8 1.0

Magnesium binding site 6 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 6 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg903 b:22.5 occ:1.00 OE2 B:GLU558 1.8 19.2 1.0 O1G B:ATP906 1.9 29.7 1.0 OG1 B:THR500 2.1 20.6 1.0 O2B B:ATP906 2.4 29.7 1.0 OG1 B:THR522 2.5 32.5 1.0 CD B:GLU558 2.7 19.2 1.0 OE1 B:GLU558 2.8 19.2 1.0 CG2 B:THR522 3.0 32.5 1.0 CB B:THR522 3.3 32.5 1.0 PG B:ATP906 3.4 29.7 1.0 CB B:THR500 3.5 20.6 1.0 PB B:ATP906 3.7 29.7 1.0 O1B B:ATP906 4.1 29.7 1.0 O3B B:ATP906 4.1 29.7 1.0 N B:THR522 4.1 32.5 1.0 N B:THR500 4.1 20.6 1.0 CG B:GLU558 4.2 19.2 1.0 CA B:THR500 4.2 20.6 1.0 O3G B:ATP906 4.3 29.7 1.0 O2G B:ATP906 4.3 29.7 1.0 CA B:THR522 4.3 32.5 1.0 O1A B:ATP906 4.4 29.7 1.0 CG2 B:THR500 4.4 20.6 1.0 CB B:LYS499 4.8 16.8 1.0 CE B:LYS499 4.8 16.8 1.0

Magnesium binding site 7 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 7 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg907 b:43.1 occ:1.00 CD B:ARG100 4.0 37.6 1.0 C J:7ID4 4.2 48.1 1.0 O J:7ID4 4.2 48.1 1.0 OG B:SER60 4.2 65.7 1.0 O B:GLY99 4.6 35.8 1.0 CA B:ARG100 4.6 37.6 1.0 NE B:ARG100 4.7 37.6 1.0 N B:THR101 4.8 43.5 1.0 ZN B:ZN904 4.8 101.3 1.0 NH1 B:ARG100 4.9 37.6 1.0

Magnesium binding site 8 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 8 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg901 b:32.4 occ:1.00 OD2 C:ASP431 2.4 19.1 1.0 O1G C:ATP905 2.7 43.4 1.0 OE1 C:GLU450 2.9 17.8 1.0 CG C:ASP431 3.5 19.1 1.0 O3A C:ATP905 3.5 43.4 1.0 OD1 C:ASP431 3.9 19.1 1.0 CD C:GLU450 4.0 17.8 1.0 PG C:ATP905 4.0 43.4 1.0 O5' C:ATP905 4.1 43.4 1.0 PA C:ATP905 4.2 43.4 1.0 O1A C:ATP905 4.4 43.4 1.0 ND2 C:ASN452 4.4 17.1 1.0 O3B C:ATP905 4.5 43.4 1.0 NH2 C:ARG309 4.5 30.6 1.0 PB C:ATP905 4.6 43.4 1.0 CB C:ASP431 4.7 19.1 1.0 CB C:GLU450 4.8 17.8 1.0 OE2 C:GLU450 4.8 17.8 1.0 CG C:GLU450 4.8 17.8 1.0 O2G C:ATP905 4.8 43.4 1.0 O3G C:ATP905 4.9 43.4 1.0 NH2 C:ARG323 4.9 25.6 1.0

Magnesium binding site 9 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 9 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg902 b:34.7 occ:1.00 O3G C:ATP906 2.5 30.4 1.0 NE2 C:HIS586 2.6 46.8 1.0 CE1 C:HIS586 3.4 46.8 1.0 CD2 C:HIS586 3.7 46.8 1.0 PG C:ATP906 3.9 30.4 1.0 O2G C:ATP906 4.3 30.4 1.0 O3B C:ATP906 4.6 30.4 1.0 ND1 C:HIS586 4.6 46.8 1.0 O C:THR496 4.6 17.8 1.0 CG C:HIS586 4.7 46.8 1.0 NZ C:LYS499 4.7 17.3 1.0

Magnesium binding site 10 out of 16 in 7txu

Magnesium Binding Sites List in 7txu

Magnesium binding site 10 out of 16 in the Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Cyanophycin Synthetase 1 From Synechocystis Sp. UTEX2470 with Atp and 16X(Asp-Arg) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg903 b:23.1 occ:1.00 OE2 C:GLU558 1.8 19.3 1.0 O1G C:ATP906 1.9 30.4 1.0 OG1 C:THR500 2.1 20.9 1.0 O2B C:ATP906 2.4 30.4 1.0 OG1 C:THR522 2.5 32.5 1.0 CD C:GLU558 2.7 19.3 1.0 OE1 C:GLU558 2.8 19.3 1.0 CG2 C:THR522 3.0 32.5 1.0 CB C:THR522 3.3 32.5 1.0 PG C:ATP906 3.4 30.4 1.0 CB C:THR500 3.5 20.9 1.0 PB C:ATP906 3.7 30.4 1.0 O1B C:ATP906 4.1 30.4 1.0 O3B C:ATP906 4.1 30.4 1.0 N C:THR522 4.1 32.5 1.0 N C:THR500 4.1 20.9 1.0 CG C:GLU558 4.2 19.3 1.0 CA C:THR500 4.2 20.9 1.0 O3G C:ATP906 4.3 30.4 1.0 O2G C:ATP906 4.3 30.4 1.0 CA C:THR522 4.3 32.5 1.0 O1A C:ATP906 4.4 30.4 1.0 CG2 C:THR500 4.4 20.9 1.0 CB C:LYS499 4.8 17.3 1.0 CE C:LYS499 4.9 17.3 1.0

Reference: