Magnesium in PDB 7u5f: Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp

Enzymatic activity of Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp

All present enzymatic activity of Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp:
2.7.4.8;

Protein crystallography data

The structure of Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp, PDB code: 7u5f was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.41 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.5, 122.9, 149.01, 90, 90, 90
R / Rfree (%) 18.6 / 22.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp (pdb code 7u5f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp, PDB code: 7u5f:

Magnesium binding site 1 out of 1 in 7u5f

Go back to Magnesium Binding Sites List in 7u5f
Magnesium binding site 1 out of 1 in the Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg301

b:49.6
occ:1.00
 OE1 D:GLU73 2.7 40.7 1.0
OE2 D:GLU73 2.7 36.5 1.0
CD D:GLU73 3.0 40.7 1.0
O D:HOH459 3.6 44.8 1.0
O D:HOH520 4.3 46.5 1.0
O D:GLU73 4.4 36.1 1.0
CG D:GLU73 4.5 35.9 1.0
N D:PHE75 4.7 29.9 1.0

Reference:

J.Abendroth, N.D.Debouver, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of Guanylate Kinase From Pseudomonas Aeruginosa PAO1 in Complex with Gmp To Be Published.
Page generated: Thu Apr 6 23:37:49 2023

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