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Magnesium in PDB 7uev: PANK3 Complex Structure with Compound Pz-4200

Enzymatic activity of PANK3 Complex Structure with Compound Pz-4200

All present enzymatic activity of PANK3 Complex Structure with Compound Pz-4200:
2.7.1.33;

Protein crystallography data

The structure of PANK3 Complex Structure with Compound Pz-4200, PDB code: 7uev was solved by S.W.White, M.Yun, R.E.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.03 / 1.80
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 98.233, 98.233, 69.096, 90, 90, 120
R / Rfree (%) 17.6 / 21.1

Other elements in 7uev:

The structure of PANK3 Complex Structure with Compound Pz-4200 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the PANK3 Complex Structure with Compound Pz-4200 (pdb code 7uev). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the PANK3 Complex Structure with Compound Pz-4200, PDB code: 7uev:

Magnesium binding site 1 out of 1 in 7uev

Go back to Magnesium Binding Sites List in 7uev
Magnesium binding site 1 out of 1 in the PANK3 Complex Structure with Compound Pz-4200


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PANK3 Complex Structure with Compound Pz-4200 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg404

b:35.6
occ:1.00
O1B A:ANP403 2.1 31.4 1.0
O A:HOH546 2.1 32.4 1.0
O3G A:ANP403 2.2 33.9 1.0
O A:HOH508 2.2 31.4 1.0
O A:HOH536 2.3 31.6 1.0
O A:HOH542 2.4 28.2 1.0
PG A:ANP403 3.3 28.3 1.0
PB A:ANP403 3.4 23.9 1.0
N3B A:ANP403 3.7 28.0 1.0
O3A A:ANP403 3.7 18.7 1.0
NZ A:LYS24 4.0 20.7 1.0
OE2 A:GLU138 4.0 71.4 1.0
O A:HOH530 4.0 27.4 1.0
O2A A:ANP403 4.1 18.3 1.0
O2G A:ANP403 4.2 27.1 1.0
OD2 A:ASP17 4.2 26.8 1.0
O A:HOH586 4.3 28.4 1.0
O A:HOH576 4.4 37.5 1.0
OD1 A:ASP17 4.4 23.7 1.0
PA A:ANP403 4.5 19.7 1.0
O1G A:ANP403 4.5 29.4 1.0
ND2 A:ASN189 4.5 29.1 1.0
O2B A:ANP403 4.5 20.9 1.0
CA A:GLY19 4.6 20.7 1.0
O A:HOH614 4.6 48.5 1.0
CG A:ASP17 4.7 25.4 1.0
CE A:LYS24 4.7 20.2 1.0
CH3 A:ACT402 4.8 39.9 1.0
O1A A:ANP403 4.9 20.9 1.0

Reference:

R.Tangallapally, A.Edwards, C.Subramanian, L.K.Sharma, M.Yun, S.W.White, S.Jackowski, C.O.Rock, R.E.Lee. Discovery of Hpank Activators with Improved Pharmacological Properties To Be Published.
Page generated: Thu Oct 3 10:00:08 2024

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