Magnesium in PDB 7uix: Clpap Complex Bound to Clps N-Terminal Extension, Class I
Enzymatic activity of Clpap Complex Bound to Clps N-Terminal Extension, Class I
All present enzymatic activity of Clpap Complex Bound to Clps N-Terminal Extension, Class I:
3.4.21.92;
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
11;
Binding sites:
The binding sites of Magnesium atom in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
(pdb code 7uix). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 11 binding sites of Magnesium where determined in the
Clpap Complex Bound to Clps N-Terminal Extension, Class I, PDB code: 7uix:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 1 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:60.0
occ:1.00
|
OG1
|
F:THR221
|
2.0
|
64.7
|
1.0
|
|
O1B
|
F:ADP801
|
2.0
|
68.5
|
1.0
|
|
HH22
|
A:ARG339
|
2.1
|
84.9
|
1.0
|
|
NH2
|
A:ARG339
|
2.2
|
84.9
|
1.0
|
|
HH21
|
A:ARG339
|
2.4
|
84.9
|
1.0
|
|
HB
|
F:THR221
|
2.5
|
64.7
|
1.0
|
|
HG1
|
F:THR221
|
2.7
|
64.7
|
1.0
|
|
CB
|
F:THR221
|
2.7
|
64.7
|
1.0
|
|
CZ
|
A:ARG339
|
2.7
|
84.9
|
1.0
|
|
HG21
|
F:THR221
|
2.9
|
64.7
|
1.0
|
|
O1A
|
F:ADP801
|
3.1
|
68.5
|
1.0
|
|
HH12
|
A:ARG339
|
3.1
|
84.9
|
1.0
|
|
NH1
|
A:ARG339
|
3.2
|
84.9
|
1.0
|
|
CG2
|
F:THR221
|
3.3
|
64.7
|
1.0
|
|
PB
|
F:ADP801
|
3.5
|
68.5
|
1.0
|
|
NE
|
A:ARG339
|
3.5
|
84.9
|
1.0
|
|
HE
|
A:ARG339
|
3.7
|
84.9
|
1.0
|
|
H
|
F:THR221
|
3.8
|
64.7
|
1.0
|
|
HG22
|
F:THR221
|
3.8
|
64.7
|
1.0
|
|
HH11
|
A:ARG339
|
3.9
|
84.9
|
1.0
|
|
O3A
|
F:ADP801
|
3.9
|
68.5
|
1.0
|
|
HG23
|
F:THR221
|
4.0
|
64.7
|
1.0
|
|
CA
|
F:THR221
|
4.1
|
64.7
|
1.0
|
|
PA
|
F:ADP801
|
4.1
|
68.5
|
1.0
|
|
N
|
F:THR221
|
4.3
|
64.7
|
1.0
|
|
O2B
|
F:ADP801
|
4.3
|
68.5
|
1.0
|
|
O3B
|
F:ADP801
|
4.4
|
68.5
|
1.0
|
|
HA
|
F:THR221
|
4.5
|
64.7
|
1.0
|
|
HD3
|
A:ARG339
|
4.6
|
84.9
|
1.0
|
|
CD
|
A:ARG339
|
4.7
|
84.9
|
1.0
|
|
Magnesium binding site 2 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 2 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:83.8
occ:1.00
|
HB
|
A:THR221
|
1.9
|
93.5
|
1.0
|
|
OG1
|
A:THR221
|
2.0
|
93.5
|
1.0
|
|
O1B
|
A:ADP801
|
2.1
|
97.3
|
1.0
|
|
O1A
|
A:ADP801
|
2.2
|
97.3
|
1.0
|
|
CB
|
A:THR221
|
2.4
|
93.5
|
1.0
|
|
H
|
A:THR221
|
2.7
|
93.5
|
1.0
|
|
O3A
|
A:ADP801
|
2.8
|
97.3
|
1.0
|
|
PB
|
A:ADP801
|
3.0
|
97.3
|
1.0
|
|
PA
|
A:ADP801
|
3.1
|
97.3
|
1.0
|
|
N
|
A:THR221
|
3.3
|
93.5
|
1.0
|
|
CA
|
A:THR221
|
3.4
|
93.5
|
1.0
|
|
HG21
|
A:THR221
|
3.5
|
93.5
|
1.0
|
|
CG2
|
A:THR221
|
3.5
|
93.5
|
1.0
|
|
O3B
|
A:ADP801
|
3.9
|
97.3
|
1.0
|
|
HG22
|
A:THR221
|
4.0
|
93.5
|
1.0
|
|
O5'
|
A:ADP801
|
4.0
|
97.3
|
1.0
|
|
HA
|
A:THR221
|
4.1
|
93.5
|
1.0
|
|
H
|
A:ALA222
|
4.2
|
92.2
|
1.0
|
|
O2B
|
A:ADP801
|
4.2
|
97.3
|
1.0
|
|
HG23
|
A:THR221
|
4.2
|
93.5
|
1.0
|
|
O2A
|
A:ADP801
|
4.2
|
97.3
|
1.0
|
|
C
|
A:THR221
|
4.3
|
93.5
|
1.0
|
|
OD2
|
A:ASP285
|
4.4
|
93.7
|
1.0
|
|
N
|
A:ALA222
|
4.5
|
92.2
|
1.0
|
|
HB2
|
A:LYS220
|
4.6
|
93.3
|
1.0
|
|
HA2
|
A:GLY219
|
4.6
|
93.6
|
1.0
|
|
C
|
A:LYS220
|
4.6
|
93.3
|
1.0
|
|
H
|
A:LYS220
|
4.7
|
93.3
|
1.0
|
|
N
|
A:LYS220
|
4.8
|
93.3
|
1.0
|
|
H3'
|
A:ADP801
|
4.9
|
97.3
|
1.0
|
|
H5'1
|
A:ADP801
|
4.9
|
97.3
|
1.0
|
|
Magnesium binding site 3 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 3 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:60.1
occ:1.00
|
HG1
|
A:THR502
|
3.0
|
72.3
|
1.0
|
|
OG1
|
A:THR502
|
3.1
|
72.3
|
1.0
|
|
H
|
A:GLY498
|
3.1
|
69.4
|
1.0
|
|
O1A
|
A:ADP802
|
3.1
|
76.1
|
1.0
|
|
H
|
A:THR502
|
3.2
|
72.3
|
1.0
|
|
HG23
|
A:THR502
|
3.3
|
72.3
|
1.0
|
|
H5'1
|
A:ADP802
|
3.4
|
76.1
|
1.0
|
|
H
|
A:LYS501
|
3.6
|
73.1
|
1.0
|
|
H
|
A:GLY500
|
3.6
|
74.1
|
1.0
|
|
HA2
|
A:GLY498
|
3.6
|
69.4
|
1.0
|
|
HG3
|
A:LYS501
|
3.8
|
73.1
|
1.0
|
|
N
|
A:GLY498
|
3.8
|
69.4
|
1.0
|
|
HA2
|
A:GLY500
|
3.9
|
74.1
|
1.0
|
|
CG2
|
A:THR502
|
4.0
|
72.3
|
1.0
|
|
CB
|
A:THR502
|
4.0
|
72.3
|
1.0
|
|
HG2
|
A:LYS501
|
4.0
|
73.1
|
1.0
|
|
N
|
A:THR502
|
4.1
|
72.3
|
1.0
|
|
HG21
|
A:THR502
|
4.2
|
72.3
|
1.0
|
|
CA
|
A:GLY498
|
4.2
|
69.4
|
1.0
|
|
C5'
|
A:ADP802
|
4.2
|
76.1
|
1.0
|
|
PA
|
A:ADP802
|
4.2
|
76.1
|
1.0
|
|
N
|
A:LYS501
|
4.2
|
73.1
|
1.0
|
|
O5'
|
A:ADP802
|
4.2
|
76.1
|
1.0
|
|
N
|
A:GLY500
|
4.3
|
74.1
|
1.0
|
|
H
|
A:GLU503
|
4.4
|
74.4
|
1.0
|
|
H
|
A:VAL499
|
4.4
|
72.4
|
1.0
|
|
H5'2
|
A:ADP802
|
4.4
|
76.1
|
1.0
|
|
CG
|
A:LYS501
|
4.4
|
73.1
|
1.0
|
|
O3B
|
A:ADP802
|
4.4
|
76.1
|
1.0
|
|
CA
|
A:GLY500
|
4.4
|
74.1
|
1.0
|
|
O3A
|
A:ADP802
|
4.6
|
76.1
|
1.0
|
|
CA
|
A:THR502
|
4.7
|
72.3
|
1.0
|
|
H2'
|
A:ADP802
|
4.7
|
76.1
|
1.0
|
|
C
|
A:GLY498
|
4.7
|
69.4
|
1.0
|
|
N
|
A:VAL499
|
4.7
|
72.4
|
1.0
|
|
HB
|
A:THR497
|
4.7
|
68.8
|
1.0
|
|
HA
|
A:THR497
|
4.7
|
68.8
|
1.0
|
|
C
|
A:GLY500
|
4.7
|
74.1
|
1.0
|
|
H8
|
A:ADP802
|
4.8
|
76.1
|
1.0
|
|
HG22
|
A:THR502
|
4.8
|
72.3
|
1.0
|
|
HB
|
A:THR502
|
4.8
|
72.3
|
1.0
|
|
Magnesium binding site 4 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 4 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg803
b:22.2
occ:1.00
|
O2B
|
B:AGS802
|
2.0
|
49.7
|
1.0
|
|
OG1
|
B:THR502
|
2.4
|
26.1
|
1.0
|
|
S1G
|
B:AGS802
|
2.6
|
49.7
|
1.0
|
|
HG1
|
B:THR604
|
3.3
|
28.1
|
1.0
|
|
PB
|
B:AGS802
|
3.4
|
49.7
|
1.0
|
|
OD1
|
B:ASP564
|
3.4
|
29.9
|
1.0
|
|
OD2
|
B:ASP564
|
3.4
|
29.9
|
1.0
|
|
HH22
|
C:ARG643
|
3.6
|
21.8
|
1.0
|
|
CB
|
B:THR502
|
3.7
|
26.1
|
1.0
|
|
O3B
|
B:AGS802
|
3.8
|
49.7
|
1.0
|
|
CG
|
B:ASP564
|
3.8
|
29.9
|
1.0
|
|
HB
|
B:THR502
|
3.8
|
26.1
|
1.0
|
|
OE2
|
B:GLU565
|
3.8
|
26.0
|
1.0
|
|
PG
|
B:AGS802
|
3.8
|
49.7
|
1.0
|
|
OG1
|
B:THR604
|
4.0
|
28.1
|
1.0
|
|
HG21
|
B:THR502
|
4.1
|
26.1
|
1.0
|
|
H
|
B:THR502
|
4.2
|
26.1
|
1.0
|
|
O1B
|
B:AGS802
|
4.2
|
49.7
|
1.0
|
|
HB
|
B:THR604
|
4.3
|
28.1
|
1.0
|
|
HB2
|
B:LYS501
|
4.3
|
28.6
|
1.0
|
|
HE2
|
B:LYS501
|
4.4
|
28.6
|
1.0
|
|
NH2
|
C:ARG643
|
4.4
|
21.8
|
1.0
|
|
CG2
|
B:THR502
|
4.4
|
26.1
|
1.0
|
|
HH21
|
B:ARG702
|
4.5
|
29.7
|
1.0
|
|
HG21
|
B:THR604
|
4.5
|
28.1
|
1.0
|
|
O3A
|
B:AGS802
|
4.5
|
49.7
|
1.0
|
|
O3G
|
B:AGS802
|
4.5
|
49.7
|
1.0
|
|
N
|
B:THR502
|
4.6
|
26.1
|
1.0
|
|
CB
|
B:THR604
|
4.7
|
28.1
|
1.0
|
|
CA
|
B:THR502
|
4.7
|
26.1
|
1.0
|
|
HH21
|
C:ARG643
|
4.7
|
21.8
|
1.0
|
|
HH12
|
C:ARG643
|
4.8
|
21.8
|
1.0
|
|
OD2
|
C:ASP582
|
4.8
|
26.9
|
1.0
|
|
O2A
|
B:AGS802
|
4.9
|
49.7
|
1.0
|
|
HG23
|
B:THR502
|
4.9
|
26.1
|
1.0
|
|
OD1
|
B:ASN606
|
4.9
|
29.4
|
1.0
|
|
HA
|
B:THR502
|
4.9
|
26.1
|
1.0
|
|
CD
|
B:GLU565
|
4.9
|
26.0
|
1.0
|
|
HG2
|
B:GLU565
|
5.0
|
26.0
|
1.0
|
|
Magnesium binding site 5 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 5 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg804
b:76.5
occ:1.00
|
O2A
|
B:AGS801
|
2.0
|
83.9
|
1.0
|
|
HG21
|
B:THR221
|
2.2
|
84.6
|
1.0
|
|
OG1
|
B:THR221
|
2.5
|
84.6
|
1.0
|
|
CG2
|
B:THR221
|
2.7
|
84.6
|
1.0
|
|
HG23
|
B:THR221
|
2.8
|
84.6
|
1.0
|
|
CB
|
B:THR221
|
3.0
|
84.6
|
1.0
|
|
HG1
|
B:THR221
|
3.1
|
84.6
|
1.0
|
|
HB
|
B:THR221
|
3.2
|
84.6
|
1.0
|
|
O2B
|
B:AGS801
|
3.4
|
83.9
|
1.0
|
|
PA
|
B:AGS801
|
3.4
|
83.9
|
1.0
|
|
HG22
|
B:THR221
|
3.6
|
84.6
|
1.0
|
|
O1A
|
B:AGS801
|
4.0
|
83.9
|
1.0
|
|
O3A
|
B:AGS801
|
4.1
|
83.9
|
1.0
|
|
H5'1
|
B:AGS801
|
4.2
|
83.9
|
1.0
|
|
PB
|
B:AGS801
|
4.2
|
83.9
|
1.0
|
|
OD1
|
B:ASP285
|
4.3
|
87.9
|
1.0
|
|
H
|
B:THR221
|
4.4
|
84.6
|
1.0
|
|
OE1
|
B:GLU225
|
4.5
|
89.5
|
1.0
|
|
CA
|
B:THR221
|
4.5
|
84.6
|
1.0
|
|
O5'
|
B:AGS801
|
4.6
|
83.9
|
1.0
|
|
O1B
|
B:AGS801
|
4.8
|
83.9
|
1.0
|
|
C5'
|
B:AGS801
|
4.8
|
83.9
|
1.0
|
|
N
|
B:THR221
|
4.9
|
84.6
|
1.0
|
|
Magnesium binding site 6 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 6 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg803
b:29.8
occ:1.00
|
HG1
|
C:THR221
|
1.7
|
29.2
|
1.0
|
|
OG1
|
C:THR221
|
2.0
|
29.2
|
1.0
|
|
O2B
|
C:AGS801
|
2.1
|
29.1
|
1.0
|
|
PB
|
C:AGS801
|
2.7
|
29.1
|
1.0
|
|
O3G
|
C:AGS801
|
2.8
|
29.1
|
1.0
|
|
O1B
|
C:AGS801
|
2.8
|
29.1
|
1.0
|
|
O3B
|
C:AGS801
|
3.3
|
29.1
|
1.0
|
|
OE2
|
C:GLU286
|
3.3
|
35.3
|
1.0
|
|
PG
|
C:AGS801
|
3.3
|
29.1
|
1.0
|
|
HH22
|
D:ARG340
|
3.3
|
24.5
|
1.0
|
|
CB
|
C:THR221
|
3.3
|
29.2
|
1.0
|
|
HB
|
C:THR221
|
3.5
|
29.2
|
1.0
|
|
S1G
|
C:AGS801
|
3.6
|
29.1
|
1.0
|
|
H
|
C:THR221
|
3.6
|
29.2
|
1.0
|
|
HG
|
C:SER321
|
3.7
|
31.8
|
1.0
|
|
HG21
|
C:THR221
|
3.9
|
29.2
|
1.0
|
|
NH2
|
D:ARG340
|
4.1
|
24.5
|
1.0
|
|
O3A
|
C:AGS801
|
4.2
|
29.1
|
1.0
|
|
CG2
|
C:THR221
|
4.2
|
29.2
|
1.0
|
|
N
|
C:THR221
|
4.2
|
29.2
|
1.0
|
|
HB2
|
C:LYS220
|
4.3
|
29.7
|
1.0
|
|
CA
|
C:THR221
|
4.3
|
29.2
|
1.0
|
|
HH21
|
D:ARG340
|
4.4
|
24.5
|
1.0
|
|
OG
|
C:SER321
|
4.4
|
31.8
|
1.0
|
|
CD
|
C:GLU286
|
4.5
|
35.3
|
1.0
|
|
HB2
|
C:ASP285
|
4.5
|
37.8
|
1.0
|
|
HE2
|
C:LYS220
|
4.5
|
29.7
|
1.0
|
|
HA
|
C:THR221
|
4.6
|
29.2
|
1.0
|
|
HH12
|
D:ARG340
|
4.6
|
24.5
|
1.0
|
|
HZ1
|
C:LYS220
|
4.6
|
29.7
|
1.0
|
|
HG23
|
C:THR221
|
4.6
|
29.2
|
1.0
|
|
O2G
|
C:AGS801
|
4.8
|
29.1
|
1.0
|
|
HH21
|
D:ARG339
|
4.9
|
26.4
|
1.0
|
|
OE1
|
C:GLU286
|
4.9
|
35.3
|
1.0
|
|
HG22
|
C:THR221
|
5.0
|
29.2
|
1.0
|
|
Magnesium binding site 7 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 7 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg804
b:22.6
occ:1.00
|
OG1
|
C:THR502
|
2.1
|
22.2
|
1.0
|
|
S1G
|
C:AGS802
|
2.5
|
24.9
|
1.0
|
|
O2B
|
C:AGS802
|
2.9
|
24.9
|
1.0
|
|
HB
|
C:THR502
|
2.9
|
22.2
|
1.0
|
|
CB
|
C:THR502
|
3.0
|
22.2
|
1.0
|
|
OD2
|
C:ASP564
|
3.1
|
28.8
|
1.0
|
|
HG21
|
C:THR502
|
3.3
|
22.2
|
1.0
|
|
O3B
|
C:AGS802
|
3.3
|
24.9
|
1.0
|
|
OD1
|
C:ASP564
|
3.4
|
28.8
|
1.0
|
|
PG
|
C:AGS802
|
3.5
|
24.9
|
1.0
|
|
O2A
|
C:AGS802
|
3.5
|
24.9
|
1.0
|
|
CG
|
C:ASP564
|
3.6
|
28.8
|
1.0
|
|
HG1
|
C:THR604
|
3.6
|
18.4
|
1.0
|
|
CG2
|
C:THR502
|
3.7
|
22.2
|
1.0
|
|
PB
|
C:AGS802
|
3.7
|
24.9
|
1.0
|
|
H
|
C:THR502
|
3.8
|
22.2
|
1.0
|
|
OD2
|
D:ASP582
|
4.1
|
29.8
|
1.0
|
|
HH21
|
C:ARG702
|
4.1
|
29.1
|
1.0
|
|
O3G
|
C:AGS802
|
4.2
|
24.9
|
1.0
|
|
HG23
|
C:THR502
|
4.3
|
22.2
|
1.0
|
|
HH22
|
C:ARG702
|
4.3
|
29.1
|
1.0
|
|
HH22
|
D:ARG643
|
4.3
|
49.7
|
1.0
|
|
CA
|
C:THR502
|
4.3
|
22.2
|
1.0
|
|
PA
|
C:AGS802
|
4.3
|
24.9
|
1.0
|
|
OG1
|
C:THR604
|
4.4
|
18.4
|
1.0
|
|
O3A
|
C:AGS802
|
4.4
|
24.9
|
1.0
|
|
HG22
|
C:THR502
|
4.4
|
22.2
|
1.0
|
|
N
|
C:THR502
|
4.4
|
22.2
|
1.0
|
|
OE2
|
C:GLU565
|
4.5
|
30.3
|
1.0
|
|
NH2
|
C:ARG702
|
4.6
|
29.1
|
1.0
|
|
O1A
|
C:AGS802
|
4.6
|
24.9
|
1.0
|
|
HA
|
C:THR502
|
4.7
|
22.2
|
1.0
|
|
HH21
|
C:ARG518
|
4.7
|
20.2
|
1.0
|
|
HH22
|
C:ARG518
|
4.8
|
20.2
|
1.0
|
|
O2G
|
C:AGS802
|
4.8
|
24.9
|
1.0
|
|
HB2
|
C:LYS501
|
4.9
|
22.1
|
1.0
|
|
HB
|
C:THR604
|
4.9
|
18.4
|
1.0
|
|
HG21
|
C:THR604
|
4.9
|
18.4
|
1.0
|
|
HH12
|
D:ARG643
|
4.9
|
49.7
|
1.0
|
|
CB
|
C:ASP564
|
5.0
|
28.8
|
1.0
|
|
NH2
|
D:ARG643
|
5.0
|
49.7
|
1.0
|
|
Magnesium binding site 8 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 8 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg803
b:21.6
occ:1.00
|
OG1
|
D:THR221
|
2.0
|
22.1
|
1.0
|
|
O3B
|
D:AGS801
|
2.7
|
23.7
|
1.0
|
|
O2B
|
D:AGS801
|
2.7
|
23.7
|
1.0
|
|
HB
|
D:THR221
|
2.9
|
22.1
|
1.0
|
|
HH22
|
E:ARG340
|
2.9
|
23.1
|
1.0
|
|
CB
|
D:THR221
|
3.0
|
22.1
|
1.0
|
|
PB
|
D:AGS801
|
3.0
|
23.7
|
1.0
|
|
O3A
|
D:AGS801
|
3.0
|
23.7
|
1.0
|
|
HG21
|
D:THR221
|
3.4
|
22.1
|
1.0
|
|
S1G
|
D:AGS801
|
3.5
|
23.7
|
1.0
|
|
HH22
|
E:ARG339
|
3.5
|
27.4
|
1.0
|
|
PG
|
D:AGS801
|
3.5
|
23.7
|
1.0
|
|
NH2
|
E:ARG340
|
3.6
|
23.1
|
1.0
|
|
HH21
|
E:ARG340
|
3.6
|
23.1
|
1.0
|
|
OD2
|
D:ASP285
|
3.6
|
26.8
|
1.0
|
|
CG2
|
D:THR221
|
3.7
|
22.1
|
1.0
|
|
H
|
D:THR221
|
3.8
|
22.1
|
1.0
|
|
O3G
|
D:AGS801
|
4.0
|
23.7
|
1.0
|
|
OD1
|
D:ASP285
|
4.2
|
26.8
|
1.0
|
|
CA
|
D:THR221
|
4.2
|
22.1
|
1.0
|
|
CG
|
D:ASP285
|
4.3
|
26.8
|
1.0
|
|
NH2
|
E:ARG339
|
4.3
|
27.4
|
1.0
|
|
HG22
|
D:THR221
|
4.3
|
22.1
|
1.0
|
|
N
|
D:THR221
|
4.3
|
22.1
|
1.0
|
|
PA
|
D:AGS801
|
4.3
|
23.7
|
1.0
|
|
HG23
|
D:THR221
|
4.4
|
22.1
|
1.0
|
|
O1B
|
D:AGS801
|
4.5
|
23.7
|
1.0
|
|
O2A
|
D:AGS801
|
4.6
|
23.7
|
1.0
|
|
O5'
|
D:AGS801
|
4.6
|
23.7
|
1.0
|
|
HA
|
D:THR221
|
4.6
|
22.1
|
1.0
|
|
HH21
|
E:ARG339
|
4.6
|
27.4
|
1.0
|
|
HG
|
D:SER321
|
4.6
|
23.4
|
1.0
|
|
HH12
|
E:ARG339
|
4.7
|
27.4
|
1.0
|
|
HH12
|
E:ARG340
|
4.8
|
23.1
|
1.0
|
|
HG
|
E:SER312
|
4.8
|
26.6
|
1.0
|
|
CZ
|
E:ARG340
|
4.8
|
23.1
|
1.0
|
|
O2G
|
D:AGS801
|
4.8
|
23.7
|
1.0
|
|
HE2
|
D:LYS220
|
4.9
|
23.1
|
1.0
|
|
HB2
|
D:LYS220
|
4.9
|
23.1
|
1.0
|
|
Magnesium binding site 9 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 9 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg804
b:23.1
occ:1.00
|
O2B
|
D:AGS802
|
2.0
|
26.7
|
1.0
|
|
OG1
|
D:THR502
|
2.3
|
21.6
|
1.0
|
|
OE2
|
D:GLU565
|
3.0
|
29.6
|
1.0
|
|
O3G
|
D:AGS802
|
3.1
|
26.7
|
1.0
|
|
HG1
|
D:THR604
|
3.2
|
22.4
|
1.0
|
|
PB
|
D:AGS802
|
3.4
|
26.7
|
1.0
|
|
OD1
|
D:ASP564
|
3.5
|
24.2
|
1.0
|
|
CB
|
D:THR502
|
3.6
|
21.6
|
1.0
|
|
HG21
|
D:THR502
|
3.9
|
21.6
|
1.0
|
|
HB3
|
D:ASP564
|
3.9
|
24.2
|
1.0
|
|
OG1
|
D:THR604
|
3.9
|
22.4
|
1.0
|
|
CG
|
D:ASP564
|
4.0
|
24.2
|
1.0
|
|
O3B
|
D:AGS802
|
4.0
|
26.7
|
1.0
|
|
HB
|
D:THR502
|
4.0
|
21.6
|
1.0
|
|
H
|
D:THR502
|
4.2
|
21.6
|
1.0
|
|
PG
|
D:AGS802
|
4.2
|
26.7
|
1.0
|
|
CD
|
D:GLU565
|
4.2
|
29.6
|
1.0
|
|
CG2
|
D:THR502
|
4.2
|
21.6
|
1.0
|
|
O1B
|
D:AGS802
|
4.3
|
26.7
|
1.0
|
|
HG23
|
D:THR502
|
4.3
|
21.6
|
1.0
|
|
O2A
|
D:AGS802
|
4.4
|
26.7
|
1.0
|
|
HB
|
D:THR604
|
4.4
|
22.4
|
1.0
|
|
CB
|
D:ASP564
|
4.5
|
24.2
|
1.0
|
|
O3A
|
D:AGS802
|
4.5
|
26.7
|
1.0
|
|
HH22
|
E:ARG643
|
4.5
|
31.1
|
1.0
|
|
OD2
|
E:ASP582
|
4.5
|
31.5
|
1.0
|
|
HG21
|
D:THR604
|
4.5
|
22.4
|
1.0
|
|
HB2
|
D:LYS501
|
4.6
|
26.1
|
1.0
|
|
HE2
|
D:LYS501
|
4.6
|
26.1
|
1.0
|
|
OD2
|
D:ASP564
|
4.6
|
24.2
|
1.0
|
|
N
|
D:THR502
|
4.6
|
21.6
|
1.0
|
|
CA
|
D:THR502
|
4.6
|
21.6
|
1.0
|
|
CB
|
D:THR604
|
4.7
|
22.4
|
1.0
|
|
H
|
D:GLU565
|
4.7
|
29.6
|
1.0
|
|
HA
|
D:THR502
|
4.8
|
21.6
|
1.0
|
|
HA
|
D:ASP564
|
4.8
|
24.2
|
1.0
|
|
HG2
|
D:GLU565
|
4.8
|
29.6
|
1.0
|
|
OE1
|
D:GLU565
|
4.9
|
29.6
|
1.0
|
|
PA
|
D:AGS802
|
5.0
|
26.7
|
1.0
|
|
S1G
|
D:AGS802
|
5.0
|
26.7
|
1.0
|
|
Magnesium binding site 10 out
of 11 in 7uix
Go back to
Magnesium Binding Sites List in 7uix
Magnesium binding site 10 out
of 11 in the Clpap Complex Bound to Clps N-Terminal Extension, Class I
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Clpap Complex Bound to Clps N-Terminal Extension, Class I within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg803
b:31.4
occ:1.00
|
O2B
|
E:AGS801
|
2.2
|
49.7
|
1.0
|
|
O1B
|
E:AGS801
|
2.5
|
49.7
|
1.0
|
|
PB
|
E:AGS801
|
2.6
|
49.7
|
1.0
|
|
HB
|
E:THR221
|
2.6
|
33.7
|
1.0
|
|
HG21
|
E:THR221
|
3.0
|
33.7
|
1.0
|
|
S1G
|
E:AGS801
|
3.0
|
49.7
|
1.0
|
|
HG22
|
E:THR221
|
3.1
|
33.7
|
1.0
|
|
OD1
|
E:ASP285
|
3.3
|
32.2
|
1.0
|
|
O3B
|
E:AGS801
|
3.3
|
49.7
|
1.0
|
|
CG2
|
E:THR221
|
3.3
|
33.7
|
1.0
|
|
HH22
|
F:ARG340
|
3.3
|
46.9
|
1.0
|
|
H
|
E:THR221
|
3.3
|
33.7
|
1.0
|
|
CB
|
E:THR221
|
3.4
|
33.7
|
1.0
|
|
PG
|
E:AGS801
|
3.4
|
49.7
|
1.0
|
|
O3G
|
E:AGS801
|
3.5
|
49.7
|
1.0
|
|
N
|
E:THR221
|
4.0
|
33.7
|
1.0
|
|
NH2
|
F:ARG340
|
4.0
|
46.9
|
1.0
|
|
O3A
|
E:AGS801
|
4.1
|
49.7
|
1.0
|
|
HB2
|
E:LYS220
|
4.1
|
31.3
|
1.0
|
|
HH21
|
F:ARG340
|
4.1
|
46.9
|
1.0
|
|
HG
|
E:SER321
|
4.2
|
27.1
|
1.0
|
|
CG
|
E:ASP285
|
4.2
|
32.2
|
1.0
|
|
HG23
|
E:THR221
|
4.3
|
33.7
|
1.0
|
|
HE2
|
E:LYS220
|
4.3
|
31.3
|
1.0
|
|
CA
|
E:THR221
|
4.3
|
33.7
|
1.0
|
|
OD2
|
E:ASP285
|
4.3
|
32.2
|
1.0
|
|
OG
|
E:SER321
|
4.4
|
27.1
|
1.0
|
|
OG1
|
E:THR221
|
4.4
|
33.7
|
1.0
|
|
HH12
|
F:ARG339
|
4.4
|
45.3
|
1.0
|
|
HZ3
|
E:LYS220
|
4.6
|
31.3
|
1.0
|
|
OE2
|
E:GLU286
|
4.6
|
35.2
|
1.0
|
|
H
|
E:LYS220
|
4.7
|
31.3
|
1.0
|
|
HA
|
E:THR221
|
4.7
|
33.7
|
1.0
|
|
HZ1
|
E:LYS220
|
4.8
|
31.3
|
1.0
|
|
HH11
|
F:ARG339
|
4.9
|
45.3
|
1.0
|
|
O2G
|
E:AGS801
|
4.9
|
49.7
|
1.0
|
|
NH1
|
F:ARG339
|
4.9
|
45.3
|
1.0
|
|
PA
|
E:AGS801
|
5.0
|
49.7
|
1.0
|
|
Reference:
S.Kim,
X.Fei,
R.T.Sauer,
T.A.Baker.
Aaa+ Protease-Adaptor Structures Reveal Altered Conformations and Ring Specialization. Nat.Struct.Mol.Biol. V. 29 1068 2022.
ISSN: ESSN 1545-9985
PubMed: 36329286
DOI: 10.1038/S41594-022-00850-3
Page generated: Thu Oct 3 10:01:17 2024
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