Magnesium in PDB 7utj: Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin

The binding sites of Magnesium atom in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin (pdb code 7utj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin, PDB code: 7utj:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:24.1 occ:1.00 O2B A:ADP401 1.9 30.9 1.0 PB A:ADP401 3.4 30.9 1.0 OD2 A:ASP154 3.8 18.7 1.0 O2A A:ADP401 3.9 30.9 1.0 OE1 A:GLN137 4.0 21.7 1.0 OD2 A:ASP11 4.0 27.3 1.0 O3A A:ADP401 4.2 30.9 1.0 O3B A:ADP401 4.2 30.9 1.0 CD A:GLN137 4.3 21.7 1.0 NE2 A:GLN137 4.3 21.7 1.0 O1B A:ADP401 4.3 30.9 1.0 OD1 A:ASP154 4.5 18.7 1.0 NZ A:LYS18 4.5 24.5 1.0 OD1 A:ASP11 4.5 27.3 1.0 PA A:ADP401 4.5 30.9 1.0 CG A:ASP154 4.6 18.7 1.0 CG2 A:VAL339 4.6 23.0 1.0 CG A:ASP11 4.7 27.3 1.0 CA A:GLY13 4.7 24.6 1.0 CA A:GLY156 4.8 18.9 1.0 CB A:VAL339 4.9 23.0 1.0

Magnesium binding site 2 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:19.6 occ:1.00 O2B B:ADP401 2.0 30.9 1.0 PB B:ADP401 3.5 30.9 1.0 OE1 B:GLN137 3.9 19.1 1.0 O2A B:ADP401 4.0 30.9 1.0 OD2 B:ASP154 4.0 16.9 1.0 OD2 B:ASP11 4.0 24.5 1.0 NE2 B:GLN137 4.1 19.1 1.0 CD B:GLN137 4.2 19.1 1.0 O3B B:ADP401 4.2 30.9 1.0 O3A B:ADP401 4.3 30.9 1.0 O1B B:ADP401 4.3 30.9 1.0 OD1 B:ASP11 4.4 24.5 1.0 NZ B:LYS18 4.5 20.0 1.0 CG2 B:VAL339 4.6 19.4 1.0 OD1 B:ASP154 4.6 16.9 1.0 PA B:ADP401 4.6 30.9 1.0 CG B:ASP11 4.7 24.5 1.0 CA B:GLY13 4.7 20.4 1.0 CA B:GLY156 4.7 17.5 1.0 CG B:ASP154 4.8 16.9 1.0 CB B:VAL339 4.9 19.4 1.0

Magnesium binding site 3 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:18.2 occ:1.00 O2B C:ADP401 2.0 30.9 1.0 PB C:ADP401 3.4 30.9 1.0 OE1 C:GLN137 3.9 17.9 1.0 OD2 C:ASP11 3.9 23.2 1.0 NE2 C:GLN137 4.0 17.9 1.0 CD C:GLN137 4.1 17.9 1.0 O2A C:ADP401 4.1 30.9 1.0 O3B C:ADP401 4.2 30.9 1.0 OD1 C:ASP11 4.2 23.2 1.0 O1B C:ADP401 4.2 30.9 1.0 OD2 C:ASP154 4.2 15.7 1.0 O3A C:ADP401 4.3 30.9 1.0 NZ C:LYS18 4.4 18.8 1.0 CG C:ASP11 4.4 23.2 1.0 CA C:GLY13 4.5 21.2 1.0 CG2 C:VAL339 4.6 18.4 1.0 PA C:ADP401 4.7 30.9 1.0 O C:HOH503 4.8 19.3 1.0 OD1 C:ASP154 4.9 15.7 1.0 CB C:VAL339 4.9 18.4 1.0 CA C:GLY156 4.9 16.0 1.0 CG C:ASP154 5.0 15.7 1.0

Magnesium binding site 4 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:20.8 occ:1.00 O2B D:ADP401 2.0 30.9 1.0 PB D:ADP401 3.4 30.9 1.0 OD2 D:ASP11 3.7 25.1 1.0 OE1 D:GLN137 3.9 19.0 1.0 NE2 D:GLN137 4.0 19.0 1.0 OD1 D:ASP11 4.1 25.1 1.0 CD D:GLN137 4.1 19.0 1.0 O2A D:ADP401 4.2 30.9 1.0 O1B D:ADP401 4.2 30.9 1.0 OD2 D:ASP154 4.2 15.4 1.0 O3B D:ADP401 4.2 30.9 1.0 NZ D:LYS18 4.3 21.5 1.0 CG D:ASP11 4.3 25.1 1.0 O3A D:ADP401 4.3 30.9 1.0 CA D:GLY13 4.4 22.0 1.0 CG2 D:VAL339 4.6 21.1 1.0 PA D:ADP401 4.7 30.9 1.0 CB D:VAL339 4.8 21.1 1.0 CE D:LYS18 4.9 21.5 1.0 OD1 D:ASP154 4.9 15.4 1.0 N D:GLY13 5.0 22.0 1.0 CG1 D:VAL339 5.0 21.1 1.0

Magnesium binding site 5 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:18.4 occ:1.00 O2B E:ADP401 2.0 22.9 1.0 PB E:ADP401 3.5 22.9 1.0 OE1 E:GLN137 3.7 23.3 1.0 NE2 E:GLN137 4.0 23.3 1.0 CD E:GLN137 4.0 23.3 1.0 O2A E:ADP401 4.1 22.9 1.0 OD2 E:ASP154 4.1 19.2 1.0 O3B E:ADP401 4.1 22.9 1.0 OD2 E:ASP11 4.2 29.2 1.0 O3A E:ADP401 4.3 22.9 1.0 O1B E:ADP401 4.4 22.9 1.0 OD1 E:ASP11 4.5 29.2 1.0 CA E:GLY13 4.6 23.7 1.0 NZ E:LYS18 4.7 27.3 1.0 CG2 E:VAL339 4.7 25.5 1.0 CA E:GLY156 4.7 17.4 1.0 PA E:ADP401 4.7 22.9 1.0 CG E:ASP11 4.8 29.2 1.0

Magnesium binding site 6 out of 6 in the Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Cryogenic Electron Microscopy 3D Map of F-Actin Bound By Human Dimeric Alpha-Catenin within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg402 b:30.3 occ:1.00 O2B F:ADP401 2.0 35.8 1.0 PB F:ADP401 3.5 35.8 1.0 OD2 F:ASP154 3.7 28.9 1.0 OE1 F:GLN137 3.8 32.2 1.0 O2A F:ADP401 4.0 35.8 1.0 CD F:GLN137 4.1 32.2 1.0 NE2 F:GLN137 4.1 32.2 1.0 OD2 F:ASP11 4.2 41.4 1.0 O3B F:ADP401 4.2 35.8 1.0 O3A F:ADP401 4.3 35.8 1.0 O1B F:ADP401 4.4 35.8 1.0 OD1 F:ASP154 4.5 28.9 1.0 CG F:ASP154 4.5 28.9 1.0 OD1 F:ASP11 4.5 41.4 1.0 CG2 F:VAL339 4.6 34.5 1.0 CA F:GLY156 4.6 30.8 1.0 NZ F:LYS18 4.7 39.9 1.0 PA F:ADP401 4.7 35.8 1.0 CA F:GLY13 4.7 38.1 1.0 CG F:ASP11 4.8 41.4 1.0 CB F:VAL339 5.0 34.5 1.0

E.S.Rangarajan, E.W.Smith, T.Izard. Distinct Inter-Domain Interactions of Dimeric Versus Monomeric Alpha-Catenin Link the Membrane or Junctions to Filaments To Be Published.