Magnesium in PDB 7uuj: Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin

The structure of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin, PDB code: 7uuj was solved by P.J.Stogios, E.Evdokimova, J.Osipiuk, R.Di Leo, E.Bordeleau, G.D.Wright, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.85 / 1.78
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.763, 107.128, 137.079, 90, 90, 90
R / Rfree (%)	17.2 / 22.1

The structure of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin (pdb code 7uuj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin, PDB code: 7uuj:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg303 b:35.7 occ:1.00 O A:HOH444 2.2 44.0 1.0 O A:HOH560 2.4 38.8 1.0 O A:HOH668 2.6 42.0 1.0 OE1 A:GLU253 4.2 26.2 1.0 O A:HOH473 4.4 34.3 1.0 OE2 A:GLU253 4.5 41.2 1.0 O A:HOH620 4.8 26.5 1.0 CD A:GLU253 4.8 31.5 1.0 O A:ASP248 4.9 22.0 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Gentamicin within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg304 b:33.4 occ:1.00 O B:HOH638 2.0 46.7 1.0 O B:HOH577 2.2 49.1 1.0 O B:HOH415 2.5 48.4 1.0 OE2 B:GLU252 2.5 35.4 1.0 CD B:GLU252 3.4 34.1 1.0 OE1 B:GLU252 3.7 35.7 1.0 O B:HOH541 4.0 46.7 1.0 OE2 B:GLU256 4.3 47.3 1.0 CG B:GLU252 4.8 33.9 1.0

P.J.Stogios, P.J.Stogios, E.Evdokimova, J.Osipiuk, R.Di Leo, E.Bordeleau, G.D.Wright, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structuralgenomics Of Infectious Diseases (Csgid). N/A N/A.