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Magnesium in PDB 7uvp: Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2 (pdb code 7uvp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2, PDB code: 7uvp:

Magnesium binding site 1 out of 1 in 7uvp

Go back to Magnesium Binding Sites List in 7uvp
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg902

b:32.9
occ:1.00
O1B A:GTP901 1.9 35.5 1.0
O3G A:GTP901 2.0 35.5 1.0
O3B A:GTP901 2.0 35.5 1.0
PG A:GTP901 2.4 35.5 1.0
PB A:GTP901 2.4 35.5 1.0
OG A:SER61 2.7 30.3 1.0
O A:PRO82 2.8 29.2 1.0
CB A:SER61 3.1 30.3 1.0
O2G A:GTP901 3.2 35.5 1.0
NZ A:LYS22 3.2 32.1 1.0
O2B A:GTP901 3.4 35.5 1.0
O3A A:GTP901 3.7 35.5 1.0
O1G A:GTP901 3.7 35.5 1.0
CE A:LYS22 3.8 32.1 1.0
OG1 A:THR23 3.8 30.1 1.0
C A:PRO82 3.8 29.2 1.0
N A:SER61 3.8 30.3 1.0
CA A:SER61 4.1 30.3 1.0
CA A:PRO82 4.2 29.2 1.0
O A:CYS81 4.4 31.6 1.0
CB A:LYS22 4.7 32.1 1.0
OD2 A:ASP80 4.8 34.9 1.0
N A:THR23 4.8 30.1 1.0
PA A:GTP901 4.8 35.5 1.0
CB A:THR23 4.9 30.1 1.0
O2A A:GTP901 4.9 35.5 1.0
O A:SER61 4.9 30.3 1.0
N A:GLY83 4.9 30.4 1.0
C A:SER61 4.9 30.3 1.0
CD A:LYS22 5.0 32.1 1.0

Reference:

C.Wang, W.Han, E.A.Groisman. Cryo-Em Structure of the Ribosome-Bound Bacteroides Thetaiotaomicron Ef-G2 To Be Published.
Page generated: Thu Oct 3 10:15:27 2024

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