Atomistry » Magnesium » PDB 7usd-7v2h » 7uyc
Atomistry »
  Magnesium »
    PDB 7usd-7v2h »
      7uyc »

Magnesium in PDB 7uyc: Inhibitor Bound VIM1

Protein crystallography data

The structure of Inhibitor Bound VIM1, PDB code: 7uyc was solved by T.O.Fischmann, G.Scapin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.93 / 1.02
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.507, 67.927, 40.165, 90, 91.67, 90
R / Rfree (%) 15.2 / 16.4

Other elements in 7uyc:

The structure of Inhibitor Bound VIM1 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Inhibitor Bound VIM1 (pdb code 7uyc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Inhibitor Bound VIM1, PDB code: 7uyc:

Magnesium binding site 1 out of 1 in 7uyc

Go back to Magnesium Binding Sites List in 7uyc
Magnesium binding site 1 out of 1 in the Inhibitor Bound VIM1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Inhibitor Bound VIM1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:20.0
occ:1.00
O A:HOH412 1.9 12.7 0.5
O A:HOH717 1.9 30.8 1.0
O A:HOH412 2.0 18.6 0.5
O A:HOH543 2.1 20.7 1.0
O A:HOH627 2.1 25.7 1.0
O A:HOH409 2.3 13.2 1.0
O A:HOH417 3.7 75.2 1.0
OE2 A:GLU149 3.9 14.6 1.0
OD2 A:ASP117 4.0 18.2 1.0
O A:GLY147 4.1 13.8 1.0
OD1 A:ASP117 4.2 12.3 1.0
N A:GLU149 4.3 10.8 1.0
CA A:ASN148 4.3 10.5 1.0
CG A:GLU149 4.4 11.9 1.0
O A:HOH691 4.4 28.2 1.0
CG A:ASP117 4.5 11.8 1.0
CD A:GLU149 4.5 11.7 1.0
OD1 A:ASN148 4.5 11.7 1.0
C A:ASN148 4.7 11.1 1.0
O A:HOH416 5.0 81.1 1.0

Reference:

T.O.Fischmann, G.Scapin. Inhibitor Bound VIM1 To Be Published.
Page generated: Thu Oct 3 10:17:20 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy