Magnesium in PDB 7vbw: Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia

The structure of Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia, PDB code: 7vbw was solved by X.F.Yan, Y.Yong, Y.G.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.58 / 2.50
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	107.574, 107.574, 40.436, 90, 90, 120
R / Rfree (%)	19.3 / 23.8

The binding sites of Magnesium atom in the Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia (pdb code 7vbw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia, PDB code: 7vbw:

Magnesium binding site 1 out of 1 in the Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Gtp-Bound Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in Burkholderia Cenocepacia within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:30.0 occ:1.00 OD2 A:ASP236 2.7 45.9 1.0 NH1 A:ARG357 2.8 57.4 1.0 O A:HOH616 2.8 41.3 1.0 O3G A:GTP501 2.9 64.9 1.0 O1B A:GTP501 3.3 46.9 1.0 O1A A:GTP501 3.5 64.6 1.0 OE1 A:GLU171 3.5 50.8 1.0 CB A:GLU171 3.7 35.5 1.0 CG A:ASP236 3.9 42.4 1.0 CZ A:ARG357 3.9 60.0 1.0 CE2 A:PHE234 4.0 32.0 1.0 CD A:GLU171 4.1 51.0 1.0 PG A:GTP501 4.1 80.7 1.0 CG A:GLU171 4.2 41.3 1.0 NH2 A:ARG357 4.3 50.1 1.0 ND2 A:ASN193 4.3 30.0 1.0 O3B A:GTP501 4.3 56.2 1.0 PB A:GTP501 4.3 40.7 1.0 CB A:ASP236 4.6 36.2 1.0 O3A A:GTP501 4.6 58.1 1.0 PA A:GTP501 4.6 71.7 1.0 O1G A:GTP501 4.7 66.7 1.0 O A:HOH618 4.7 30.0 1.0 CZ A:PHE234 4.8 29.4 1.0 N A:GLU171 4.8 34.0 1.0 OD1 A:ASN193 4.8 30.0 1.0 CA A:GLU171 4.8 34.7 1.0 OD1 A:ASP236 4.9 42.5 1.0 CD2 A:PHE234 4.9 31.0 1.0 CG A:ASN193 5.0 30.0 1.0

X.F.Yan, C.Yang, M.Wang, Y.Yong, Y.Deng, Y.G.Gao. Structural Analyses of the Aaa+ Atpase Domain of the Transcriptional Regulator Gtrr in the Bdsf Quorum-Sensing System in Burkholderia Cenocepacia. Febs Lett. 2021.
ISSN: ISSN 0014-5793
PubMed: 34837384
DOI: 10.1002/1873-3468.14244