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Magnesium in PDB 7vlm: Structure of A Bacteria Protein

Protein crystallography data

The structure of Structure of A Bacteria Protein, PDB code: 7vlm was solved by Z.Heng, X.S.Wang, X.Z.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.13 / 1.38
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 105.371, 32.405, 62.594, 90, 120.37, 90
R / Rfree (%) 18.2 / 20.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Bacteria Protein (pdb code 7vlm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Bacteria Protein, PDB code: 7vlm:

Magnesium binding site 1 out of 1 in 7vlm

Go back to Magnesium Binding Sites List in 7vlm
Magnesium binding site 1 out of 1 in the Structure of A Bacteria Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Bacteria Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg206

b:11.4
occ:1.00
O A:HOH330 2.3 17.4 1.0
OD1 A:ASN173 2.3 15.4 1.0
OE2 A:GLU139 2.4 15.9 1.0
OE1 A:GLU139 2.5 15.3 1.0
CD A:GLU139 2.8 15.7 1.0
CG A:ASN173 3.4 16.2 1.0
H A:ASN173 3.8 16.9 1.0
HD21 A:ASN173 3.8 24.7 1.0
ND2 A:ASN173 4.0 20.5 1.0
HA A:ASN173 4.2 19.5 1.0
CG A:GLU139 4.4 16.8 1.0
N A:ASN173 4.4 14.1 1.0
OE1 A:GLU172 4.4 23.1 1.0
O A:HOH460 4.6 28.6 1.0
CB A:ASN173 4.6 15.4 1.0
CA A:ASN173 4.6 16.2 1.0
HG2 A:GLU139 4.7 20.1 1.0
HB3 A:GLU139 4.8 16.6 1.0
HG3 A:GLU139 4.8 20.1 1.0
HB3 A:GLU172 4.8 18.6 1.0
HD22 A:ASN173 4.9 24.7 1.0
O A:HOH378 5.0 19.3 1.0
HB3 A:ASN173 5.0 18.4 1.0
HA A:GLU172 5.0 16.0 1.0

Reference:

Z.Heng, X.S.Wang, X.Z.Li. Structure of A Bacteria Protein To Be Published.
Page generated: Thu Oct 3 10:31:13 2024

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