Magnesium in PDB 7vlt: Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim

The binding sites of Magnesium atom in the Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim (pdb code 7vlt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim, PDB code: 7vlt:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2004 b:119.2 occ:1.00 OE1 A:GLN753 2.0 84.8 1.0 OG A:SER708 2.2 79.5 1.0 O3G A:ATP2006 2.4 85.5 1.0 CD A:GLN753 2.8 76.7 1.0 O1B A:ATP2006 2.9 85.5 1.0 O3B A:ATP2006 3.1 85.5 1.0 NE2 A:GLN753 3.2 84.4 1.0 OD1 A:ASP832 3.2 65.2 1.0 PG A:ATP2006 3.3 85.5 1.0 CB A:SER708 3.5 70.0 1.0 PB A:ATP2006 3.6 85.5 1.0 O2G A:ATP2006 3.8 85.5 1.0 OD2 A:ASP832 3.9 84.7 1.0 CG A:ASP832 3.9 72.9 1.0 CG A:GLN753 4.1 61.2 1.0 N A:SER708 4.3 60.3 1.0 CB A:GLN753 4.4 54.3 1.0 CA A:SER708 4.5 53.6 1.0 O1G A:ATP2006 4.7 85.5 1.0 O3A A:ATP2006 4.7 85.5 1.0 CG1 A:VAL865 4.7 70.0 1.0 O2B A:ATP2006 4.7 85.5 1.0

Magnesium binding site 2 out of 2 in the Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2B in Complex with Mg-Atp/Adp and Levcromakalim within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2005 b:128.0 occ:1.00 O1B A:ADP2003 2.1 115.5 1.0 OG A:SER1349 2.7 81.3 1.0 PB A:ADP2003 3.2 115.5 1.0 CB A:SER1349 3.4 87.9 1.0 O2B A:ADP2003 3.7 115.5 1.0 O3B A:ADP2003 3.7 115.5 1.0 OE1 A:GLN1390 3.9 87.3 1.0 OE2 A:GLU1470 4.0 87.5 1.0 O1A A:ADP2003 4.3 115.5 1.0 N A:SER1349 4.3 87.2 1.0 OD1 A:ASP1469 4.4 84.0 1.0 OD2 A:ASP1469 4.4 98.4 1.0 CA A:SER1349 4.4 82.2 1.0 O3A A:ADP2003 4.5 115.5 1.0 CD A:GLU1470 4.7 86.0 1.0 CG A:ASP1469 4.8 85.9 1.0 OE1 A:GLU1470 4.9 84.0 1.0 PA A:ADP2003 4.9 115.5 1.0

D.Ding, J.X.Wu, X.Duan, S.Ma, L.Lai, L.Chen. Structural Identification of Vasodilator Binding Sites on the SUR2 Subunit. Nat Commun V. 13 2675 2022.
ISSN: ESSN 2041-1723
PubMed: 35562524
DOI: 10.1038/S41467-022-30428-Y