Magnesium in PDB 7vsh: Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State.

Enzymatic activity of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State.

All present enzymatic activity of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State.:
7.6.2.1;

Other elements in 7vsh:

The structure of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State. also contains other interesting chemical elements:

Aluminium (Al) 1 atom
Fluorine (F) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State. (pdb code 7vsh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State., PDB code: 7vsh:

Magnesium binding site 1 out of 1 in 7vsh

Go back to Magnesium Binding Sites List in 7vsh
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of A Human ATP11C-CDC50A Flippase Reconstituted in the Nanodisc in E1P State. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1100

b:22.4
occ:1.00
 F1 A:ALF1101 2.0 22.2 1.0
OD1 A:ASP816 2.7 18.0 1.0
O A:THR411 3.2 20.2 1.0
OD2 A:ASP409 3.4 14.8 1.0
OE2 A:GLU837 3.6 40.8 1.0
AL A:ALF1101 3.7 22.2 1.0
CG A:ASP816 3.7 18.0 1.0
CG A:GLU837 3.9 40.8 1.0
F3 A:ALF1101 4.0 22.2 1.0
OD2 A:ASP816 4.1 18.0 1.0
CA A:GLY817 4.1 22.9 1.0
CD A:GLU837 4.1 40.8 1.0
N A:GLY817 4.1 22.9 1.0
F4 A:ALF1101 4.2 22.2 1.0
C A:THR411 4.3 20.2 1.0
CG A:ASP409 4.5 14.8 1.0
C A:ASP816 4.5 18.0 1.0
OD2 A:ASP820 4.6 25.3 1.0
CB A:GLU837 4.7 40.8 1.0
OD1 A:ASP409 4.9 14.8 1.0
CB A:THR411 4.9 20.2 1.0
O A:ASP816 4.9 18.0 1.0

Reference:

H.Nakanishi, K.Hayashida, T.Nishizawa, A.Oshima, K.Abe. Cryo-Em of the ATP11C Flippase Reconstituted in Nanodiscs Shows A Distended Phospholipid Bilayer Inner Membrane Around Transmembrane Helix 2. J.Biol.Chem. 01498 2021.
ISSN: ESSN 1083-351X
PubMed: 34922944
DOI: 10.1016/J.JBC.2021.101498
Page generated: Thu Mar 31 04:11:33 2022

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