Magnesium in PDB 7vvy: Tra Module of NUA4

The binding sites of Magnesium atom in the Tra Module of NUA4 (pdb code 7vvy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Tra Module of NUA4, PDB code: 7vvy:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Tra Module of NUA4


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Tra Module of NUA4 within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg1001 b:61.2 occ:1.00 O2B F:ATP1002 2.6 32.7 1.0 O1G F:ATP1002 2.7 32.7 1.0 O2G F:ATP1002 3.2 32.7 1.0 PG F:ATP1002 3.5 32.7 1.0 PB F:ATP1002 3.8 32.7 1.0 OD2 F:ASP159 4.0 37.5 1.0 O3B F:ATP1002 4.0 32.7 1.0 OD1 F:ASP159 4.2 37.5 1.0 CG F:ASP159 4.3 37.5 1.0 O1A F:ATP1002 4.7 32.7 1.0 O3A F:ATP1002 4.8 32.7 1.0 O3G F:ATP1002 4.9 32.7 1.0 O1B F:ATP1002 4.9 32.7 1.0

Magnesium binding site 2 out of 2 in the Tra Module of NUA4


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Tra Module of NUA4 within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg501 b:76.0 occ:1.00 O3G G:ATP502 2.7 106.2 1.0 O1G G:ATP502 2.8 106.2 1.0 O1B G:ATP502 2.8 106.2 1.0 PG G:ATP502 3.2 106.2 1.0 OE1 G:GLN137 3.7 51.2 1.0 PB G:ATP502 3.9 106.2 1.0 O3B G:ATP502 3.9 106.2 1.0 CD G:GLN137 4.0 51.2 1.0 NE2 G:GLN137 4.0 51.2 1.0 OD1 G:ASP154 4.1 62.1 1.0 O2A G:ATP502 4.2 106.2 1.0 O3A G:ATP502 4.4 106.2 1.0 OD1 G:ASP11 4.5 61.0 1.0 OD2 G:ASP11 4.5 61.0 1.0 O2G G:ATP502 4.6 106.2 1.0 CA G:GLY13 4.6 84.0 1.0 OD2 G:ASP154 4.7 62.1 1.0 CG2 G:VAL339 4.7 49.3 1.0 CG G:ASP154 4.8 62.1 1.0 PA G:ATP502 4.9 106.2 1.0 CG G:GLN137 4.9 51.2 1.0 CG G:ASP11 5.0 61.0 1.0 CB G:GLN137 5.0 51.2 1.0

K.Qu, K.Chen, H.Wang, X.Li, Z.Chen. Structure of the NUA4 Acetyltransferase Complex Bound to the Nucleosome. Nature V. 610 569 2022.
ISSN: ESSN 1476-4687
PubMed: 36198799
DOI: 10.1038/S41586-022-05303-X