Magnesium in PDB 7wgr: Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex

Enzymatic activity of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex

Other elements in 7wgr:

Magnesium Binding Sites:

Magnesium binding site 1 out of 2 in 7wgr

Magnesium Binding Sites List in 7wgr

Magnesium binding site 1 out of 2 in the Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:24.6 occ:1.00 OD1 A:ASN444 2.0 27.4 1.0 O2B A:TPP1103 2.0 28.2 1.0 O2A A:TPP1103 2.1 28.2 1.0 CG A:ASN444 2.5 27.4 1.0 ND2 A:ASN444 2.6 27.4 1.0 O A:ILE446 2.7 28.0 1.0 PB A:TPP1103 2.9 28.2 1.0 O3A A:TPP1103 2.9 28.2 1.0 PA A:TPP1103 2.9 28.2 1.0 OD1 A:ASP411 3.3 26.4 1.0 O3B A:TPP1103 3.4 28.2 1.0 C A:ILE446 3.9 28.0 1.0 O1A A:TPP1103 4.0 28.2 1.0 CB A:ASN444 4.0 27.4 1.0 O7 A:TPP1103 4.1 28.2 1.0 CG A:ASP411 4.2 26.4 1.0 O1B A:TPP1103 4.2 28.2 1.0 OD2 A:ASP411 4.5 26.4 1.0 N A:ILE446 4.6 28.0 1.0 CA A:GLY447 4.6 28.2 1.0 N A:ASN444 4.7 27.4 1.0 N A:GLY447 4.7 28.2 1.0 CA A:ASN444 4.8 27.4 1.0 CA A:ILE446 4.8 28.0 1.0 N A:ASP411 4.8 26.4 1.0 CG2 A:ILE446 5.0 28.0 1.0

Magnesium binding site 2 out of 2 in 7wgr

Magnesium Binding Sites List in 7wgr

Magnesium binding site 2 out of 2 in the Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1102 b:25.1 occ:1.00 OD1 B:ASN444 1.9 27.8 1.0 O2A B:TPP1103 2.0 27.7 1.0 O3B B:TPP1103 2.0 27.7 1.0 O B:ILE446 2.6 28.6 1.0 PB B:TPP1103 2.6 27.7 1.0 CG B:ASN444 2.7 27.8 1.0 O2B B:TPP1103 2.9 27.7 1.0 O3A B:TPP1103 2.9 27.7 1.0 ND2 B:ASN444 2.9 27.8 1.0 PA B:TPP1103 2.9 27.7 1.0 OD1 B:ASP411 3.0 26.0 1.0 C B:ILE446 3.8 28.6 1.0 O1A B:TPP1103 3.9 27.7 1.0 CB B:ASN444 4.1 27.8 1.0 O1B B:TPP1103 4.1 27.7 1.0 O7 B:TPP1103 4.1 27.7 1.0 CG B:ASP411 4.2 26.0 1.0 CA B:GLY447 4.5 28.8 1.0 N B:ILE446 4.6 28.6 1.0 N B:ASN444 4.6 27.8 1.0 N B:GLY447 4.6 28.8 1.0 N B:ASP411 4.7 26.0 1.0 CA B:ASN444 4.8 27.8 1.0 CA B:ILE446 4.8 28.6 1.0 OD2 B:ASP411 4.8 26.0 1.0 O B:VAL442 4.9 25.3 1.0 N B:ALA412 4.9 25.3 1.0 CG2 B:ILE446 5.0 28.6 1.0

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