Magnesium in PDB 7wj4: Structural Basis For Ligand Binding Modes of Ctp Synthase

Enzymatic activity of Structural Basis For Ligand Binding Modes of Ctp Synthase

Magnesium Binding Sites:

Magnesium binding site 1 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 1 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg704 b:60.6 occ:1.00 OD1 D:ASP70 2.0 63.2 1.0 O2G D:ATP702 2.0 66.6 1.0 OE2 D:GLU145 2.4 45.1 1.0 O2B D:ATP702 2.6 66.6 1.0 CG D:ASP70 2.9 63.2 1.0 PG D:ATP702 2.9 66.6 1.0 O3G D:ATP702 3.0 66.6 1.0 OD2 D:ASP70 3.3 63.2 1.0 CD D:GLU145 3.5 45.1 1.0 CE D:LYS38 3.5 45.5 1.0 PB D:ATP702 3.6 66.6 1.0 O3B D:ATP702 3.7 66.6 1.0 OE1 D:GLU145 3.8 45.1 1.0 CB D:ASP70 4.1 63.2 1.0 O4 A:UTP601 4.1 67.7 1.0 CD D:LYS38 4.1 45.5 1.0 NZ D:LYS38 4.2 45.5 1.0 O1G D:ATP702 4.3 66.6 1.0 N D:GLY17 4.3 54.8 1.0 O1B D:ATP702 4.3 66.6 1.0 CA D:GLY17 4.4 54.8 1.0 CG D:GLU145 4.7 45.1 1.0 CE D:LYS16 4.8 50.9 1.0 CB D:LYS16 4.8 50.9 1.0 O3A D:ATP702 4.9 66.6 1.0 O1A D:ATP702 5.0 66.6 1.0

Magnesium binding site 2 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 2 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg705 b:117.0 occ:1.00 O1B D:GTP701 2.0 123.2 1.0 PB D:GTP701 3.2 123.2 1.0 O2A D:GTP701 3.3 123.2 1.0 O3B D:GTP701 3.3 123.2 1.0 N2 D:GTP701 3.3 123.2 1.0 O3A D:GTP701 4.2 123.2 1.0 C5' D:GTP701 4.2 123.2 1.0 O2B D:GTP701 4.2 123.2 1.0 PA D:GTP701 4.3 123.2 1.0 C2 D:GTP701 4.4 123.2 1.0 O5' D:GTP701 4.7 123.2 1.0 N3 D:GTP701 4.7 123.2 1.0 PG D:GTP701 4.9 123.2 1.0

Magnesium binding site 3 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 3 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg707 b:56.0 occ:1.00 O3A D:UTP706 2.5 67.9 1.0 O1A D:UTP706 3.1 67.9 1.0 PA D:UTP706 3.2 67.9 1.0 O2B D:UTP706 3.4 67.9 1.0 PB D:UTP706 3.5 67.9 1.0 O2G D:UTP706 3.7 67.9 1.0 O5' D:UTP706 3.8 67.9 1.0 NZ D:LYS228 4.0 71.9 1.0 O1G D:UTP706 4.3 67.9 1.0 C5' D:UTP706 4.4 67.9 1.0 PG D:UTP706 4.4 67.9 1.0 O3B D:UTP706 4.5 67.9 1.0 NZ D:LYS192 4.5 58.8 1.0 O2A D:UTP706 4.6 67.9 1.0 O1B D:UTP706 4.7 67.9 1.0 OG A:SER12 4.7 58.8 1.0 OE2 D:GLU190 5.0 75.0 1.0

Magnesium binding site 4 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 4 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:57.3 occ:1.00 O3A A:UTP601 2.5 67.7 1.0 O1A A:UTP601 3.1 67.7 1.0 PA A:UTP601 3.2 67.7 1.0 O2B A:UTP601 3.4 67.7 1.0 PB A:UTP601 3.5 67.7 1.0 O2G A:UTP601 3.7 67.7 1.0 O5' A:UTP601 3.8 67.7 1.0 NZ A:LYS228 4.0 71.0 1.0 O1G A:UTP601 4.3 67.7 1.0 C5' A:UTP601 4.4 67.7 1.0 PG A:UTP601 4.4 67.7 1.0 O3B A:UTP601 4.5 67.7 1.0 NZ A:LYS192 4.5 58.8 1.0 O2A A:UTP601 4.6 67.7 1.0 O1B A:UTP601 4.7 67.7 1.0 OG D:SER12 4.7 58.7 1.0 OE2 A:GLU190 5.0 74.7 1.0

Magnesium binding site 5 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 5 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg606 b:59.9 occ:1.00 OD1 A:ASP70 2.0 63.0 1.0 O2G A:ATP604 2.0 66.7 1.0 OE2 A:GLU145 2.4 45.0 1.0 O2B A:ATP604 2.6 66.7 1.0 CG A:ASP70 2.9 63.0 1.0 PG A:ATP604 2.9 66.7 1.0 O3G A:ATP604 3.0 66.7 1.0 OD2 A:ASP70 3.3 63.0 1.0 CD A:GLU145 3.5 45.0 1.0 CE A:LYS38 3.5 45.5 1.0 PB A:ATP604 3.6 66.7 1.0 O3B A:ATP604 3.7 66.7 1.0 OE1 A:GLU145 3.8 45.0 1.0 CB A:ASP70 4.1 63.0 1.0 O4 D:UTP706 4.1 67.9 1.0 CD A:LYS38 4.1 45.5 1.0 NZ A:LYS38 4.2 45.5 1.0 O1G A:ATP604 4.3 66.7 1.0 N A:GLY17 4.3 55.0 1.0 O1B A:ATP604 4.3 66.7 1.0 CA A:GLY17 4.4 55.0 1.0 CG A:GLU145 4.7 45.0 1.0 CE A:LYS16 4.8 51.1 1.0 CB A:LYS16 4.8 51.1 1.0 O3A A:ATP604 4.9 66.7 1.0 O1A A:ATP604 5.0 66.7 1.0

Magnesium binding site 6 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 6 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg607 b:115.9 occ:1.00 O1B A:GTP603 2.0 123.0 1.0 PB A:GTP603 3.2 123.0 1.0 O2A A:GTP603 3.3 123.0 1.0 O3B A:GTP603 3.3 123.0 1.0 N2 A:GTP603 3.3 123.0 1.0 O3A A:GTP603 4.2 123.0 1.0 C5' A:GTP603 4.2 123.0 1.0 O2B A:GTP603 4.2 123.0 1.0 PA A:GTP603 4.3 123.0 1.0 C2 A:GTP603 4.4 123.0 1.0 O5' A:GTP603 4.7 123.0 1.0 N3 A:GTP603 4.7 123.0 1.0 PG A:GTP603 4.9 123.0 1.0

Magnesium binding site 7 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 7 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg704 b:60.2 occ:1.00 OD1 B:ASP70 2.0 63.4 1.0 O2G B:ATP702 2.0 66.5 1.0 OE2 B:GLU145 2.4 45.2 1.0 O2B B:ATP702 2.6 66.5 1.0 CG B:ASP70 2.9 63.4 1.0 PG B:ATP702 2.9 66.5 1.0 O3G B:ATP702 3.0 66.5 1.0 OD2 B:ASP70 3.3 63.4 1.0 CD B:GLU145 3.5 45.2 1.0 CE B:LYS38 3.5 45.5 1.0 PB B:ATP702 3.6 66.5 1.0 O3B B:ATP702 3.7 66.5 1.0 OE1 B:GLU145 3.8 45.2 1.0 CB B:ASP70 4.1 63.4 1.0 O4 C:UTP601 4.1 67.9 1.0 CD B:LYS38 4.1 45.5 1.0 NZ B:LYS38 4.2 45.5 1.0 O1G B:ATP702 4.3 66.5 1.0 N B:GLY17 4.3 54.9 1.0 O1B B:ATP702 4.3 66.5 1.0 CA B:GLY17 4.4 54.9 1.0 CG B:GLU145 4.7 45.2 1.0 CE B:LYS16 4.8 51.2 1.0 CB B:LYS16 4.8 51.2 1.0 O3A B:ATP702 4.9 66.5 1.0 O1A B:ATP702 5.0 66.5 1.0

Magnesium binding site 8 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 8 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg705 b:115.5 occ:1.00 O1B B:GTP701 2.0 122.5 1.0 PB B:GTP701 3.2 122.5 1.0 O2A B:GTP701 3.3 122.5 1.0 O3B B:GTP701 3.3 122.5 1.0 N2 B:GTP701 3.3 122.5 1.0 O3A B:GTP701 4.2 122.5 1.0 C5' B:GTP701 4.2 122.5 1.0 O2B B:GTP701 4.2 122.5 1.0 PA B:GTP701 4.3 122.5 1.0 C2 B:GTP701 4.4 122.5 1.0 O5' B:GTP701 4.7 122.5 1.0 N3 B:GTP701 4.7 122.5 1.0 PG B:GTP701 4.9 122.5 1.0

Magnesium binding site 9 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 9 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg707 b:57.4 occ:1.00 O3A B:UTP706 2.5 67.9 1.0 O2A B:UTP706 3.1 67.9 1.0 PA B:UTP706 3.2 67.9 1.0 O1B B:UTP706 3.4 67.9 1.0 PB B:UTP706 3.5 67.9 1.0 O1G B:UTP706 3.7 67.9 1.0 O5' B:UTP706 3.8 67.9 1.0 NZ B:LYS228 4.0 71.5 1.0 O2G B:UTP706 4.3 67.9 1.0 C5' B:UTP706 4.4 67.9 1.0 PG B:UTP706 4.4 67.9 1.0 O3B B:UTP706 4.5 67.9 1.0 NZ B:LYS192 4.5 59.0 1.0 O1A B:UTP706 4.6 67.9 1.0 O2B B:UTP706 4.7 67.9 1.0 OG C:SER12 4.7 59.5 1.0 OE2 B:GLU190 5.0 75.6 1.0

Magnesium binding site 10 out of 12 in 7wj4

Magnesium Binding Sites List in 7wj4

Magnesium binding site 10 out of 12 in the Structural Basis For Ligand Binding Modes of Ctp Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Structural Basis For Ligand Binding Modes of Ctp Synthase within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg602 b:58.4 occ:1.00 O3A C:UTP601 2.5 67.9 1.0 O2A C:UTP601 3.1 67.9 1.0 PA C:UTP601 3.2 67.9 1.0 O1B C:UTP601 3.4 67.9 1.0 PB C:UTP601 3.5 67.9 1.0 O1G C:UTP601 3.7 67.9 1.0 O5' C:UTP601 3.8 67.9 1.0 NZ C:LYS228 4.0 71.8 1.0 O2G C:UTP601 4.3 67.9 1.0 C5' C:UTP601 4.4 67.9 1.0 PG C:UTP601 4.4 67.9 1.0 O3B C:UTP601 4.5 67.9 1.0 NZ C:LYS192 4.5 59.0 1.0 O1A C:UTP601 4.6 67.9 1.0 O2B C:UTP601 4.7 67.9 1.0 OG B:SER12 4.7 59.0 1.0 OE2 C:GLU190 5.0 75.4 1.0

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