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Magnesium in PDB 7x06: Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp

Enzymatic activity of Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp

All present enzymatic activity of Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp:
2.4.1.16;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp (pdb code 7x06). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp, PDB code: 7x06:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7x06

Go back to Magnesium Binding Sites List in 7x06
Magnesium binding site 1 out of 2 in the Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:53.7
occ:1.00
O2A A:UDP1001 3.7 54.8 1.0
O A:VAL383 3.8 47.6 1.0
O3B A:UDP1001 4.3 54.8 1.0
CB A:ASP382 4.6 48.6 1.0
OD2 A:ASP382 4.7 48.6 1.0
O3A A:UDP1001 4.9 54.8 1.0
PA A:UDP1001 4.9 54.8 1.0
C3' A:UDP1001 5.0 54.8 1.0

Magnesium binding site 2 out of 2 in 7x06

Go back to Magnesium Binding Sites List in 7x06
Magnesium binding site 2 out of 2 in the Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryoem Structure of Chitin Synthase 1 From Phytophthora Sojae Complexed with Udp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1002

b:52.4
occ:1.00
O2A B:UDP1001 3.7 54.4 1.0
O B:VAL383 3.8 47.5 1.0
O3B B:UDP1001 4.3 54.4 1.0
CB B:ASP382 4.6 48.3 1.0
OD2 B:ASP382 4.7 48.3 1.0
O3A B:UDP1001 4.9 54.4 1.0
PA B:UDP1001 4.9 54.4 1.0
C3' B:UDP1001 5.0 54.4 1.0

Reference:

W.Chen, P.Cao, Y.Liu, A.Yu, D.Wang, L.Chen, R.Sundarraj, Z.Yuchi, Y.Gong, H.Merzendorfer, Q.Yang. Structural Basis For Directional Chitin Biosynthesis. Nature V. 610 402 2022.
ISSN: ESSN 1476-4687
PubMed: 36131020
DOI: 10.1038/S41586-022-05244-5
Page generated: Thu Oct 3 11:44:18 2024

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