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Magnesium in PDB 7y1j: Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation.

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation. (pdb code 7y1j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation., PDB code: 7y1j:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7y1j

Go back to Magnesium Binding Sites List in 7y1j
Magnesium binding site 1 out of 2 in the Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1603

b:57.2
occ:1.00
OG A:SER1349 2.0 55.6 1.0
O2G A:ATP1602 2.4 57.1 1.0
O2B A:ATP1602 3.0 57.1 1.0
CB A:SER1349 3.3 55.6 1.0
PG A:ATP1602 3.6 57.1 1.0
O3B A:ATP1602 3.6 57.1 1.0
OD1 A:ASP1469 3.7 63.2 1.0
PB A:ATP1602 3.9 57.1 1.0
NH1 A:ARG935 3.9 56.9 1.0
N A:SER1349 4.0 55.6 1.0
OE2 A:GLU1470 4.0 67.0 1.0
O3G A:ATP1602 4.1 57.1 1.0
CA A:SER1349 4.2 55.6 1.0
O3A A:ATP1602 4.2 57.1 1.0
CD A:GLU1470 4.2 67.0 1.0
OD2 A:ASP1469 4.4 63.2 1.0
OE1 A:GLU1470 4.4 67.0 1.0
CG A:ASP1469 4.5 63.2 1.0
CD A:ARG935 4.6 56.9 1.0
O1A A:ATP1602 4.8 57.1 1.0
NZ A:LYS1348 4.8 58.0 1.0
O1G A:ATP1602 4.9 57.1 1.0
CZ A:ARG935 4.9 56.9 1.0
CE A:LYS1348 5.0 58.0 1.0
CG A:GLU1470 5.0 67.0 1.0

Magnesium binding site 2 out of 2 in 7y1j

Go back to Magnesium Binding Sites List in 7y1j
Magnesium binding site 2 out of 2 in the Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2A in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1604

b:40.7
occ:1.00
OG A:SER708 2.0 38.7 1.0
OE1 A:GLN753 2.0 37.9 1.0
O1G A:ATP1601 2.2 42.9 1.0
O2B A:ATP1601 2.2 42.9 1.0
CD A:GLN753 2.7 37.9 1.0
NE2 A:GLN753 2.9 37.9 1.0
PG A:ATP1601 3.3 42.9 1.0
CB A:SER708 3.3 38.7 1.0
PB A:ATP1601 3.4 42.9 1.0
O3B A:ATP1601 3.5 42.9 1.0
OD1 A:ASP832 3.9 40.0 1.0
O3G A:ATP1601 3.9 42.9 1.0
CG A:GLN753 4.0 37.9 1.0
N A:SER708 4.0 38.7 1.0
CA A:SER708 4.2 38.7 1.0
OD2 A:ASP832 4.2 40.0 1.0
O1B A:ATP1601 4.3 42.9 1.0
OD2 A:ASP833 4.3 46.4 1.0
O1A A:ATP1601 4.4 42.9 1.0
CB A:GLN753 4.4 37.9 1.0
CG A:ASP832 4.4 40.0 1.0
O3A A:ATP1601 4.4 42.9 1.0
O2G A:ATP1601 4.6 42.9 1.0
CG A:ASP833 4.8 46.4 1.0
PA A:ATP1601 4.9 42.9 1.0

Reference:

D.Ding, T.Hou, L.Chen. The Structural Mechanism of the SUR2A Containing Katp Channel Inhibition By A Regulatory Helix To Be Published.
Page generated: Thu Oct 3 13:25:19 2024

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