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Magnesium in PDB 7y1l: Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation (pdb code 7y1l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation, PDB code: 7y1l:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7y1l

Go back to Magnesium Binding Sites List in 7y1l
Magnesium binding site 1 out of 2 in the Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1601

b:171.4
occ:1.00
O3B A:ATP1604 2.2 169.9 1.0
O2B A:ATP1604 2.3 169.9 1.0
OG A:SER1349 2.3 166.8 1.0
O3G A:ATP1604 2.4 169.9 1.0
O2G A:ATP1604 2.4 169.9 1.0
PG A:ATP1604 2.4 169.9 1.0
PB A:ATP1604 2.7 169.9 1.0
O1A A:ATP1604 2.7 169.9 1.0
CB A:SER1349 3.0 166.8 1.0
O3A A:ATP1604 3.1 169.9 1.0
PA A:ATP1604 3.2 169.9 1.0
O2A A:ATP1604 3.5 169.9 1.0
N A:SER1349 3.7 166.8 1.0
O1G A:ATP1604 3.9 169.9 1.0
CA A:SER1349 4.0 166.8 1.0
O1B A:ATP1604 4.1 169.9 1.0
O5' A:ATP1604 4.7 169.9 1.0
N A:LYS1348 4.9 171.5 1.0
C A:SER1349 4.9 166.8 1.0
C A:LYS1348 4.9 171.5 1.0
N A:SER1350 4.9 168.1 1.0

Magnesium binding site 2 out of 2 in 7y1l

Go back to Magnesium Binding Sites List in 7y1l
Magnesium binding site 2 out of 2 in the Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2B in Complex with Mg-Atp and Repaglinide in the Inward-Facing Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1602

b:121.0
occ:1.00
OE1 A:GLN753 2.2 112.3 1.0
OG A:SER708 2.2 122.7 1.0
O1G A:ATP1603 2.3 126.8 1.0
O2G A:ATP1603 2.4 126.8 1.0
PG A:ATP1603 2.5 126.8 1.0
NE2 A:GLN753 2.6 112.3 1.0
CD A:GLN753 2.7 112.3 1.0
O3B A:ATP1603 2.7 126.8 1.0
O2B A:ATP1603 2.9 126.8 1.0
O1A A:ATP1603 3.0 126.8 1.0
CB A:SER708 3.0 122.7 1.0
PB A:ATP1603 3.4 126.8 1.0
O3A A:ATP1603 3.9 126.8 1.0
PA A:ATP1603 3.9 126.8 1.0
O3G A:ATP1603 4.0 126.8 1.0
CG A:GLN753 4.1 112.3 1.0
CA A:SER708 4.4 122.7 1.0
N A:SER708 4.6 122.7 1.0
CB A:GLN753 4.7 112.3 1.0
O2A A:ATP1603 4.7 126.8 1.0
O1B A:ATP1603 4.7 126.8 1.0
OD2 A:ASP832 4.9 122.0 1.0

Reference:

D.Ding, T.Hou, L.Chen. The Structural Mechanism of the SUR2A Containing Katp Channel Inhibition By A Regulatory Helix To Be Published.
Page generated: Thu Oct 3 13:25:28 2024

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