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Magnesium in PDB 7y1m: Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation (pdb code 7y1m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation, PDB code: 7y1m:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7y1m

Go back to Magnesium Binding Sites List in 7y1m
Magnesium binding site 1 out of 2 in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1601

b:93.9
occ:1.00
O2B A:ADP1605 2.3 121.3 1.0
O1B A:ADP1605 2.4 121.3 1.0
PB A:ADP1605 2.8 121.3 1.0
O3B A:ADP1605 3.8 121.3 1.0
O3A A:ADP1605 4.0 121.3 1.0
CB A:SER1349 4.1 111.8 1.0
OG A:SER1349 4.3 111.8 1.0
O1A A:ADP1605 4.8 121.3 1.0
PA A:ADP1605 5.0 121.3 1.0

Magnesium binding site 2 out of 2 in 7y1m

Go back to Magnesium Binding Sites List in 7y1m
Magnesium binding site 2 out of 2 in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Inward-Facing Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1602

b:76.4
occ:1.00
O1G A:ATP1603 2.2 84.1 1.0
OE1 A:GLN753 2.3 70.0 1.0
O2G A:ATP1603 2.3 84.1 1.0
OG A:SER708 2.4 72.6 1.0
PG A:ATP1603 2.5 84.1 1.0
CD A:GLN753 2.6 70.0 1.0
NE2 A:GLN753 2.9 70.0 1.0
O3B A:ATP1603 2.9 84.1 1.0
CB A:SER708 3.1 72.6 1.0
OD1 A:ASP832 3.3 78.5 1.0
CG A:GLN753 3.7 70.0 1.0
CB A:GLN753 3.7 70.0 1.0
O3G A:ATP1603 4.0 84.1 1.0
CG A:ASP832 4.2 78.5 1.0
OD2 A:ASP832 4.3 78.5 1.0
O1A A:ATP1603 4.3 84.1 1.0
CA A:SER708 4.4 72.6 1.0
PB A:ATP1603 4.4 84.1 1.0
N A:SER708 4.5 72.6 1.0
O3A A:ATP1603 4.7 84.1 1.0
CG A:LYS707 4.9 82.1 1.0
PA A:ATP1603 4.9 84.1 1.0

Reference:

D.Ding, T.Hou, L.Chen. The Structural Mechanism of the SUR2A Containing Katp Channel Inhibition By A Regulatory Helix To Be Published.
Page generated: Thu Oct 3 13:26:11 2024

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