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Magnesium in PDB 7y1n: Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State (pdb code 7y1n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State, PDB code: 7y1n:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7y1n

Go back to Magnesium Binding Sites List in 7y1n
Magnesium binding site 1 out of 2 in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3002

b:116.2
occ:1.00
O1B A:ADP3001 2.2 121.8 1.0
CB A:SER1349 2.9 119.9 1.0
O3A A:ADP3001 3.1 121.8 1.0
PB A:ADP3001 3.1 121.8 1.0
O3B A:ADP3001 3.5 121.8 1.0
N A:SER1349 3.7 119.9 1.0
OG A:SER1349 3.8 119.9 1.0
CA A:SER1349 3.8 119.9 1.0
PA A:ADP3001 4.0 121.8 1.0
O2A A:ADP3001 4.1 121.8 1.0
O1A A:ADP3001 4.4 121.8 1.0
O2B A:ADP3001 4.5 121.8 1.0
CB A:LYS1348 4.8 125.2 1.0
C A:LYS1348 4.8 125.2 1.0
CE A:LYS1348 4.9 125.2 1.0

Magnesium binding site 2 out of 2 in 7y1n

Go back to Magnesium Binding Sites List in 7y1n
Magnesium binding site 2 out of 2 in the Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2B in Complex with Mg-Atp, Mg-Adp, and Repaglinide in the Partially Occluded State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3003

b:98.0
occ:1.00
O3G A:ATP3004 2.2 106.4 1.0
O3B A:ATP3004 2.2 106.4 1.0
OE1 A:GLN753 2.3 92.1 1.0
PG A:ATP3004 2.4 106.4 1.0
CD A:GLN753 2.5 92.1 1.0
O1G A:ATP3004 2.6 106.4 1.0
NE2 A:GLN753 2.7 92.1 1.0
CB A:SER708 3.1 98.1 1.0
PB A:ATP3004 3.4 106.4 1.0
O1B A:ATP3004 3.5 106.4 1.0
OG A:SER708 3.5 98.1 1.0
CG A:GLN753 3.5 92.1 1.0
O2G A:ATP3004 3.9 106.4 1.0
OD2 A:ASP832 3.9 93.5 1.0
OD1 A:ASP832 4.0 93.5 1.0
CB A:GLN753 4.0 92.1 1.0
CA A:SER708 4.2 98.1 1.0
CG A:ASP832 4.3 93.5 1.0
O2B A:ATP3004 4.4 106.4 1.0
N A:SER708 4.4 98.1 1.0
O3A A:ATP3004 4.4 106.4 1.0

Reference:

D.Ding, T.Hou, L.Chen. The Structural Mechanism of the SUR2A Containing Katp Channel Inhibition By A Regulatory Helix To Be Published.
Page generated: Thu Jul 27 20:41:00 2023

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