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Magnesium in PDB 7yp8: Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine
Enzymatic activity of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine
All present enzymatic activity of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine:
6.1.1.4;
6.1.1.4;
Protein crystallography data
The structure of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine, PDB code: 7yp8
was solved by
L.Pang,
S.De Graef,
S.V.Strelkov,
S.D.Weeks,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 56.21 / 2.10 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 48.794, 82.979, 229.25, 90, 90, 90 |
| R / Rfree (%) | 17.9 / 23.1 |
Other elements in 7yp8:
The structure of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine also contains other interesting chemical elements:
| Zinc | (Zn) | 1 atom |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine
(pdb code 7yp8). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine, PDB code: 7yp8:
In total only one binding site of Magnesium was determined in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine, PDB code: 7yp8:
Magnesium binding site 1 out of 1 in 7yp8
Go back to
Magnesium Binding Sites List in 7yp8
Magnesium binding site 1 out
of 1 in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine within 5.0Å range:
|
Reference:
L.Pang,
S.De Graef,
B.Zhang,
S.V.Strelkov,
A.Van Aerschot,
S.D.Weeks.
The Essential Role of A Structured Water in Base Recognition of Class II Aminoacyl-Trna Synthetases To Be Published.
Page generated: Thu Oct 3 15:33:36 2024
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