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Magnesium in PDB 7z6s: Matcap Bound to A Human 14 Protofilament Microtubule

Other elements in 7z6s:

The structure of Matcap Bound to A Human 14 Protofilament Microtubule also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Matcap Bound to A Human 14 Protofilament Microtubule (pdb code 7z6s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Matcap Bound to A Human 14 Protofilament Microtubule, PDB code: 7z6s:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7z6s

Go back to Magnesium Binding Sites List in 7z6s
Magnesium binding site 1 out of 2 in the Matcap Bound to A Human 14 Protofilament Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Matcap Bound to A Human 14 Protofilament Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:79.2
occ:1.00
O3B A:GTP501 1.9 73.4 1.0
OE2 A:GLU71 2.0 79.5 1.0
O1B A:GTP501 2.0 73.4 1.0
O3G A:GTP501 2.0 73.4 1.0
PG A:GTP501 2.3 73.4 1.0
PB A:GTP501 2.3 73.4 1.0
O2G A:GTP501 3.0 73.4 1.0
CD A:GLU71 3.1 79.5 1.0
O2B A:GTP501 3.4 73.4 1.0
O3A A:GTP501 3.5 73.4 1.0
O1G A:GTP501 3.7 73.4 1.0
CG A:GLU71 3.8 79.5 1.0
OE1 A:GLU71 4.0 79.5 1.0
CB A:ASP98 4.2 85.1 1.0
OD2 A:ASP98 4.3 85.1 1.0
OG1 A:THR145 4.3 72.9 1.0
CB A:THR145 4.4 72.9 1.0
OD1 A:ASP69 4.4 75.2 1.0
N A:GLN11 4.6 67.0 1.0
CB A:GLN11 4.7 67.0 1.0
CG A:ASP98 4.7 85.1 1.0
PA A:GTP501 4.9 73.4 1.0
OE1 A:GLN11 5.0 67.0 1.0

Magnesium binding site 2 out of 2 in 7z6s

Go back to Magnesium Binding Sites List in 7z6s
Magnesium binding site 2 out of 2 in the Matcap Bound to A Human 14 Protofilament Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Matcap Bound to A Human 14 Protofilament Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg502

b:83.1
occ:1.00
O3B K:GTP501 1.9 79.9 1.0
OE2 K:GLU71 2.0 83.6 1.0
O1B K:GTP501 2.0 79.9 1.0
O3G K:GTP501 2.0 79.9 1.0
PG K:GTP501 2.3 79.9 1.0
PB K:GTP501 2.3 79.9 1.0
O2G K:GTP501 3.0 79.9 1.0
CD K:GLU71 3.1 83.6 1.0
O2B K:GTP501 3.4 79.9 1.0
O3A K:GTP501 3.5 79.9 1.0
O1G K:GTP501 3.7 79.9 1.0
CG K:GLU71 3.8 83.6 1.0
OE1 K:GLU71 4.0 83.6 1.0
CB K:ASP98 4.2 87.6 1.0
OD2 K:ASP98 4.3 87.6 1.0
OG1 K:THR145 4.3 80.6 1.0
CB K:THR145 4.4 80.6 1.0
OD1 K:ASP69 4.4 80.4 1.0
N K:GLN11 4.6 75.2 1.0
CB K:GLN11 4.7 75.2 1.0
CG K:ASP98 4.7 87.6 1.0
PA K:GTP501 4.9 79.9 1.0
OE1 K:GLN11 5.0 75.2 1.0

Reference:

L.Landskron, J.Bak, A.Adamopoulos, K.Kaplani, M.Moraiti, L.G.Van Den Hengel, J.Y.Song, O.B.Bleijerveld, J.Nieuwenhuis, T.Heidebrecht, L.Henneman, M.J.Moutin, M.Barisic, S.Taraviras, A.Perrakis, T.R.Brummelkamp. Posttranslational Modification of Microtubules By the Matcap Detyrosinase. Science V. 376 N6020 2022.
ISSN: ESSN 1095-9203
PubMed: 35482892
DOI: 10.1126/SCIENCE.ABN6020
Page generated: Thu Oct 3 16:17:02 2024

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