Magnesium in PDB 7z8g: Cytoplasmic Dynein-1 Motor Domain

The binding sites of Magnesium atom in the Cytoplasmic Dynein-1 Motor Domain (pdb code 7z8g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cytoplasmic Dynein-1 Motor Domain, PDB code: 7z8g:

Magnesium binding site 1 out of 1 in the Cytoplasmic Dynein-1 Motor Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cytoplasmic Dynein-1 Motor Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg4703 b:52.2 occ:1.00 NH2 A:ARG2726 1.9 54.3 1.0 OE1 A:GLU2344 2.2 57.1 1.0 O1B A:ATP4702 2.3 57.1 1.0 O3G A:ATP4702 2.6 57.1 1.0 OG A:SER2231 2.7 54.6 1.0 CB A:SER2231 3.1 54.6 1.0 CZ A:ARG2726 3.2 54.3 1.0 CD A:GLU2344 3.4 57.1 1.0 PB A:ATP4702 3.6 57.1 1.0 NH1 A:ARG2726 3.8 54.3 1.0 PG A:ATP4702 3.8 57.1 1.0 O3B A:ATP4702 3.9 57.1 1.0 OD1 A:ASP2304 4.0 57.6 1.0 OE2 A:GLU2344 4.0 57.1 1.0 N A:SER2231 4.1 54.6 1.0 CG A:LYS2230 4.1 53.6 1.0 NE A:ARG2726 4.2 54.3 1.0 CA A:SER2231 4.2 54.6 1.0 O3A A:ATP4702 4.2 57.1 1.0 OD2 A:ASP2304 4.4 57.6 1.0 O1G A:ATP4702 4.4 57.1 1.0 CG A:ASP2304 4.5 57.6 1.0 CB A:GLU2344 4.6 57.1 1.0 CG A:GLU2344 4.6 57.1 1.0 CD A:LYS2230 4.6 53.6 1.0 O2B A:ATP4702 4.9 57.1 1.0 CE A:LYS2230 5.0 53.6 1.0 OE1 A:GLU2688 5.0 53.0 1.0 O2G A:ATP4702 5.0 57.1 1.0

S.Chaaban, A.P.Carter. Structure of Dynein-Dynactin on Microtubules Shows Tandem Adaptor Binding. Nature V. 610 212 2022.
ISSN: ESSN 1476-4687
PubMed: 36071160
DOI: 10.1038/S41586-022-05186-Y