Magnesium in PDB 7ze3: Pucd-LH2 Complex From Rps. Palustris
Magnesium Binding Sites:
Magnesium binding site 1 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 1 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg101
b:20.8
occ:1.00
|
MG
|
A:BCL101
|
0.0
|
20.8
|
1.0
|
NE2
|
A:HIS31
|
1.9
|
17.1
|
1.0
|
ND
|
A:BCL101
|
2.0
|
20.7
|
1.0
|
NB
|
A:BCL101
|
2.1
|
21.1
|
1.0
|
NC
|
A:BCL101
|
2.1
|
20.8
|
1.0
|
NA
|
A:BCL101
|
2.2
|
20.9
|
1.0
|
CD2
|
A:HIS31
|
2.7
|
16.9
|
1.0
|
C4D
|
A:BCL101
|
3.0
|
20.2
|
1.0
|
CE1
|
A:HIS31
|
3.0
|
17.8
|
1.0
|
C4B
|
A:BCL101
|
3.1
|
21.4
|
1.0
|
C1B
|
A:BCL101
|
3.1
|
20.4
|
1.0
|
C1C
|
A:BCL101
|
3.1
|
20.3
|
1.0
|
C4A
|
A:BCL101
|
3.2
|
20.8
|
1.0
|
C1D
|
A:BCL101
|
3.2
|
20.1
|
1.0
|
C4C
|
A:BCL101
|
3.2
|
21.4
|
1.0
|
C1A
|
A:BCL101
|
3.2
|
20.7
|
1.0
|
CHC
|
A:BCL101
|
3.4
|
20.6
|
1.0
|
CHB
|
A:BCL101
|
3.4
|
20.8
|
1.0
|
CHA
|
A:BCL101
|
3.4
|
20.6
|
1.0
|
CHD
|
A:BCL101
|
3.5
|
20.3
|
1.0
|
CG
|
A:HIS31
|
4.0
|
16.5
|
1.0
|
ND1
|
A:HIS31
|
4.0
|
17.3
|
1.0
|
C3D
|
A:BCL101
|
4.2
|
20.2
|
1.0
|
C2B
|
A:BCL101
|
4.3
|
21.0
|
1.0
|
C3B
|
A:BCL101
|
4.3
|
21.3
|
1.0
|
C2D
|
A:BCL101
|
4.3
|
19.9
|
1.0
|
C2C
|
A:BCL101
|
4.4
|
20.9
|
1.0
|
C3C
|
A:BCL101
|
4.5
|
20.9
|
1.0
|
C3A
|
A:BCL101
|
4.5
|
20.2
|
1.0
|
CMD
|
B:BCL101
|
4.5
|
16.1
|
1.0
|
C2A
|
A:BCL101
|
4.5
|
20.4
|
1.0
|
CBD
|
A:BCL101
|
4.9
|
20.1
|
1.0
|
CBC
|
A:BCL101
|
5.0
|
20.4
|
1.0
|
|
Magnesium binding site 2 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 2 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg102
b:27.9
occ:1.00
|
MG
|
A:BCL102
|
0.0
|
27.9
|
1.0
|
ON1
|
A:CXM1
|
2.0
|
27.3
|
1.0
|
ND
|
A:BCL102
|
2.0
|
27.8
|
1.0
|
NB
|
A:BCL102
|
2.1
|
27.7
|
1.0
|
NC
|
A:BCL102
|
2.1
|
27.3
|
1.0
|
NA
|
A:BCL102
|
2.2
|
29.6
|
1.0
|
C4D
|
A:BCL102
|
3.0
|
28.6
|
1.0
|
C4B
|
A:BCL102
|
3.1
|
27.0
|
1.0
|
C1B
|
A:BCL102
|
3.1
|
27.1
|
1.0
|
C1C
|
A:BCL102
|
3.1
|
26.9
|
1.0
|
C1D
|
A:BCL102
|
3.1
|
27.1
|
1.0
|
C4A
|
A:BCL102
|
3.2
|
28.3
|
1.0
|
CN
|
A:CXM1
|
3.2
|
27.9
|
1.0
|
C4C
|
A:BCL102
|
3.2
|
26.2
|
1.0
|
C1A
|
A:BCL102
|
3.2
|
30.4
|
1.0
|
CHC
|
A:BCL102
|
3.4
|
27.1
|
1.0
|
CHB
|
A:BCL102
|
3.4
|
27.1
|
1.0
|
C14
|
B:BCL101
|
3.4
|
29.3
|
1.0
|
CHA
|
A:BCL102
|
3.5
|
29.9
|
1.0
|
CHD
|
A:BCL102
|
3.5
|
26.8
|
1.0
|
N
|
A:CXM1
|
3.8
|
27.6
|
1.0
|
C13
|
B:BCL101
|
4.1
|
26.9
|
1.0
|
ON2
|
A:CXM1
|
4.2
|
30.0
|
1.0
|
C3D
|
A:BCL102
|
4.2
|
28.6
|
1.0
|
C2B
|
A:BCL102
|
4.3
|
26.8
|
1.0
|
C2D
|
A:BCL102
|
4.3
|
27.4
|
1.0
|
C3B
|
A:BCL102
|
4.3
|
27.3
|
1.0
|
C2C
|
A:BCL102
|
4.4
|
26.9
|
1.0
|
C3C
|
A:BCL102
|
4.5
|
27.4
|
1.0
|
C3A
|
A:BCL102
|
4.5
|
29.7
|
1.0
|
C2A
|
A:BCL102
|
4.5
|
31.4
|
1.0
|
C16
|
B:BCL101
|
4.6
|
23.9
|
1.0
|
CG
|
A:GLN3
|
4.9
|
27.8
|
1.0
|
CBD
|
A:BCL102
|
4.9
|
29.5
|
1.0
|
CD1
|
B:ILE26
|
5.0
|
13.5
|
1.0
|
C15
|
B:BCL101
|
5.0
|
24.2
|
1.0
|
|
Magnesium binding site 3 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 3 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg101
b:17.3
occ:1.00
|
MG
|
B:BCL101
|
0.0
|
17.3
|
1.0
|
NE2
|
B:HIS40
|
1.9
|
13.6
|
1.0
|
ND
|
B:BCL101
|
2.0
|
17.2
|
1.0
|
NB
|
B:BCL101
|
2.1
|
17.0
|
1.0
|
NC
|
B:BCL101
|
2.1
|
17.8
|
1.0
|
NA
|
B:BCL101
|
2.2
|
16.5
|
1.0
|
CE1
|
B:HIS40
|
2.8
|
14.4
|
1.0
|
CD2
|
B:HIS40
|
3.0
|
14.2
|
1.0
|
C4D
|
B:BCL101
|
3.0
|
16.7
|
1.0
|
C4B
|
B:BCL101
|
3.1
|
17.0
|
1.0
|
C1B
|
B:BCL101
|
3.1
|
17.5
|
1.0
|
C1C
|
B:BCL101
|
3.1
|
17.7
|
1.0
|
C4A
|
B:BCL101
|
3.1
|
16.4
|
1.0
|
C1D
|
B:BCL101
|
3.2
|
16.3
|
1.0
|
C4C
|
B:BCL101
|
3.2
|
16.6
|
1.0
|
C1A
|
B:BCL101
|
3.2
|
16.8
|
1.0
|
CHC
|
B:BCL101
|
3.4
|
17.4
|
1.0
|
CHB
|
B:BCL101
|
3.4
|
17.2
|
1.0
|
CHA
|
B:BCL101
|
3.5
|
16.9
|
1.0
|
CHD
|
B:BCL101
|
3.5
|
15.8
|
1.0
|
CMB
|
C:BCL101
|
3.9
|
13.9
|
1.0
|
ND1
|
B:HIS40
|
4.0
|
13.4
|
1.0
|
CG
|
B:HIS40
|
4.1
|
13.6
|
1.0
|
C3D
|
B:BCL101
|
4.2
|
17.0
|
1.0
|
C2B
|
B:BCL101
|
4.3
|
18.5
|
1.0
|
CBB
|
C:BCL101
|
4.3
|
14.4
|
1.0
|
C3B
|
B:BCL101
|
4.3
|
18.8
|
1.0
|
C2D
|
B:BCL101
|
4.3
|
16.6
|
1.0
|
C2C
|
B:BCL101
|
4.5
|
17.6
|
1.0
|
C3C
|
B:BCL101
|
4.5
|
17.0
|
1.0
|
C3A
|
B:BCL101
|
4.5
|
17.4
|
1.0
|
C2A
|
B:BCL101
|
4.5
|
16.6
|
1.0
|
CMD
|
A:BCL101
|
4.8
|
19.1
|
1.0
|
C2B
|
C:BCL101
|
4.9
|
12.8
|
1.0
|
CBD
|
B:BCL101
|
5.0
|
14.9
|
1.0
|
CBC
|
B:BCL101
|
5.0
|
17.3
|
1.0
|
|
Magnesium binding site 4 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 4 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1701
b:40.0
occ:1.00
|
MG
|
S:BCL1701
|
0.0
|
40.0
|
1.0
|
ND
|
S:BCL1701
|
2.0
|
44.2
|
1.0
|
NB
|
S:BCL1701
|
2.1
|
32.4
|
1.0
|
NC
|
S:BCL1701
|
2.1
|
37.6
|
1.0
|
NA
|
S:BCL1701
|
2.2
|
42.6
|
1.0
|
O
|
S:SER57
|
2.3
|
29.0
|
1.0
|
C
|
S:SER57
|
2.8
|
26.9
|
1.0
|
C4D
|
S:BCL1701
|
3.0
|
45.9
|
1.0
|
C1B
|
S:BCL1701
|
3.1
|
32.3
|
1.0
|
C4B
|
S:BCL1701
|
3.1
|
28.4
|
1.0
|
C1C
|
S:BCL1701
|
3.1
|
32.9
|
1.0
|
C1D
|
S:BCL1701
|
3.1
|
44.4
|
1.0
|
C4A
|
S:BCL1701
|
3.2
|
38.9
|
1.0
|
C4C
|
S:BCL1701
|
3.2
|
38.0
|
1.0
|
C1A
|
S:BCL1701
|
3.2
|
44.4
|
1.0
|
CHB
|
S:BCL1701
|
3.4
|
35.5
|
1.0
|
C4
|
S:BCL1701
|
3.4
|
49.1
|
1.0
|
CHC
|
S:BCL1701
|
3.4
|
28.8
|
1.0
|
CA
|
S:SER57
|
3.4
|
26.7
|
1.0
|
CHA
|
S:BCL1701
|
3.5
|
45.8
|
1.0
|
CHD
|
S:BCL1701
|
3.5
|
41.6
|
1.0
|
N
|
S:GLY58
|
3.6
|
25.9
|
1.0
|
CA
|
S:GLY58
|
3.9
|
26.4
|
1.0
|
CB
|
S:SER57
|
4.0
|
25.1
|
1.0
|
C3D
|
S:BCL1701
|
4.2
|
46.3
|
1.0
|
C2B
|
S:BCL1701
|
4.3
|
29.0
|
1.0
|
C2D
|
S:BCL1701
|
4.3
|
45.2
|
1.0
|
C3B
|
S:BCL1701
|
4.3
|
26.6
|
1.0
|
C2C
|
S:BCL1701
|
4.4
|
32.5
|
1.0
|
C3C
|
S:BCL1701
|
4.5
|
35.8
|
1.0
|
C3A
|
S:BCL1701
|
4.5
|
41.3
|
1.0
|
C2A
|
S:BCL1701
|
4.5
|
45.5
|
1.0
|
OG
|
S:SER57
|
4.7
|
25.3
|
1.0
|
N
|
S:SER57
|
4.7
|
28.5
|
1.0
|
O2A
|
S:BCL1701
|
4.8
|
53.3
|
1.0
|
C3
|
S:BCL1701
|
4.8
|
57.5
|
1.0
|
C
|
S:GLY58
|
4.8
|
27.2
|
1.0
|
CBD
|
S:BCL1701
|
4.9
|
47.5
|
1.0
|
CD
|
B:ARG30
|
5.0
|
23.3
|
1.0
|
NH1
|
B:ARG30
|
5.0
|
28.2
|
1.0
|
|
Magnesium binding site 5 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 5 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1702
b:41.5
occ:1.00
|
MG
|
S:BCL1702
|
0.0
|
41.5
|
1.0
|
ND
|
S:BCL1702
|
2.0
|
47.9
|
1.0
|
NB
|
S:BCL1702
|
2.1
|
34.6
|
1.0
|
NC
|
S:BCL1702
|
2.1
|
37.8
|
1.0
|
O
|
S:SER73
|
2.2
|
23.0
|
1.0
|
NA
|
S:BCL1702
|
2.2
|
45.6
|
1.0
|
C
|
S:SER73
|
2.9
|
23.1
|
1.0
|
C4D
|
S:BCL1702
|
3.0
|
50.4
|
1.0
|
C4B
|
S:BCL1702
|
3.1
|
30.1
|
1.0
|
C1B
|
S:BCL1702
|
3.1
|
33.9
|
1.0
|
C1C
|
S:BCL1702
|
3.1
|
33.5
|
1.0
|
C1D
|
S:BCL1702
|
3.1
|
47.3
|
1.0
|
C4A
|
S:BCL1702
|
3.2
|
41.2
|
1.0
|
C4C
|
S:BCL1702
|
3.2
|
38.9
|
1.0
|
C1A
|
S:BCL1702
|
3.2
|
49.0
|
1.0
|
CHC
|
S:BCL1702
|
3.4
|
29.2
|
1.0
|
CHB
|
S:BCL1702
|
3.4
|
36.6
|
1.0
|
CHA
|
S:BCL1702
|
3.5
|
50.3
|
1.0
|
CHD
|
S:BCL1702
|
3.5
|
42.8
|
1.0
|
CA
|
S:SER73
|
3.6
|
22.7
|
1.0
|
N
|
S:GLY74
|
3.8
|
22.5
|
1.0
|
CB
|
S:SER73
|
3.9
|
20.2
|
1.0
|
CA
|
S:GLY74
|
4.0
|
22.6
|
1.0
|
C3D
|
S:BCL1702
|
4.2
|
51.2
|
1.0
|
C2B
|
S:BCL1702
|
4.3
|
31.9
|
1.0
|
C2D
|
S:BCL1702
|
4.3
|
49.5
|
1.0
|
C3B
|
S:BCL1702
|
4.3
|
29.7
|
1.0
|
C3C
|
S:BCL1702
|
4.4
|
35.6
|
1.0
|
C2C
|
S:BCL1702
|
4.4
|
34.0
|
1.0
|
C3A
|
S:BCL1702
|
4.5
|
45.6
|
1.0
|
C2A
|
S:BCL1702
|
4.5
|
49.9
|
1.0
|
OG
|
S:SER73
|
4.6
|
20.9
|
1.0
|
O
|
S:GLY74
|
4.8
|
25.7
|
1.0
|
C
|
S:GLY74
|
4.8
|
22.2
|
1.0
|
N
|
S:SER73
|
5.0
|
21.0
|
1.0
|
CBD
|
S:BCL1702
|
5.0
|
53.5
|
1.0
|
NH1
|
D:ARG30
|
5.0
|
26.5
|
1.0
|
|
Magnesium binding site 6 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 6 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1703
b:46.3
occ:1.00
|
MG
|
S:BCL1703
|
0.0
|
46.3
|
1.0
|
ND
|
S:BCL1703
|
2.0
|
51.4
|
1.0
|
NB
|
S:BCL1703
|
2.1
|
40.2
|
1.0
|
NC
|
S:BCL1703
|
2.1
|
43.9
|
1.0
|
NA
|
S:BCL1703
|
2.2
|
49.8
|
1.0
|
O
|
S:SER89
|
2.3
|
42.2
|
1.0
|
C
|
S:SER89
|
2.9
|
36.5
|
1.0
|
C4D
|
S:BCL1703
|
3.0
|
53.0
|
1.0
|
C1B
|
S:BCL1703
|
3.1
|
39.6
|
1.0
|
C4B
|
S:BCL1703
|
3.1
|
37.0
|
1.0
|
C1C
|
S:BCL1703
|
3.1
|
40.7
|
1.0
|
C4A
|
S:BCL1703
|
3.1
|
46.7
|
1.0
|
C1D
|
S:BCL1703
|
3.2
|
50.2
|
1.0
|
C4C
|
S:BCL1703
|
3.2
|
44.8
|
1.0
|
C1A
|
S:BCL1703
|
3.2
|
53.1
|
1.0
|
CHB
|
S:BCL1703
|
3.4
|
42.5
|
1.0
|
CHC
|
S:BCL1703
|
3.4
|
37.1
|
1.0
|
CHA
|
S:BCL1703
|
3.5
|
54.5
|
1.0
|
CHD
|
S:BCL1703
|
3.5
|
47.3
|
1.0
|
CA
|
S:SER89
|
3.5
|
34.9
|
1.0
|
N
|
S:GLY90
|
3.7
|
36.0
|
1.0
|
CB
|
S:SER89
|
3.8
|
37.1
|
1.0
|
CA
|
S:GLY90
|
4.0
|
37.4
|
1.0
|
C3D
|
S:BCL1703
|
4.2
|
53.2
|
1.0
|
C2B
|
S:BCL1703
|
4.3
|
37.4
|
1.0
|
C2D
|
S:BCL1703
|
4.3
|
52.1
|
1.0
|
C3B
|
S:BCL1703
|
4.3
|
35.6
|
1.0
|
C2C
|
S:BCL1703
|
4.4
|
39.8
|
1.0
|
C3C
|
S:BCL1703
|
4.4
|
42.7
|
1.0
|
C3A
|
S:BCL1703
|
4.5
|
49.6
|
1.0
|
C2A
|
S:BCL1703
|
4.5
|
54.1
|
1.0
|
OG
|
S:SER89
|
4.6
|
36.5
|
1.0
|
NH1
|
F:ARG30
|
4.8
|
34.8
|
1.0
|
CD
|
F:ARG30
|
4.9
|
28.6
|
1.0
|
C
|
S:GLY90
|
4.9
|
39.9
|
1.0
|
N
|
S:SER89
|
4.9
|
36.4
|
1.0
|
CBD
|
S:BCL1703
|
5.0
|
55.6
|
1.0
|
|
Magnesium binding site 7 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 7 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1704
b:48.3
occ:1.00
|
MG
|
S:BCL1704
|
0.0
|
48.3
|
1.0
|
ND
|
S:BCL1704
|
2.0
|
53.3
|
1.0
|
NB
|
S:BCL1704
|
2.1
|
40.0
|
1.0
|
NC
|
S:BCL1704
|
2.1
|
45.1
|
1.0
|
NA
|
S:BCL1704
|
2.2
|
50.8
|
1.0
|
O
|
S:SER9
|
2.3
|
63.2
|
1.0
|
C
|
S:SER9
|
2.9
|
61.0
|
1.0
|
C4D
|
S:BCL1704
|
3.0
|
54.5
|
1.0
|
C1B
|
S:BCL1704
|
3.1
|
39.6
|
1.0
|
C4B
|
S:BCL1704
|
3.1
|
38.5
|
1.0
|
C1C
|
S:BCL1704
|
3.1
|
40.2
|
1.0
|
C4A
|
S:BCL1704
|
3.2
|
47.3
|
1.0
|
C1D
|
S:BCL1704
|
3.2
|
51.7
|
1.0
|
C4C
|
S:BCL1704
|
3.2
|
46.0
|
1.0
|
C1A
|
S:BCL1704
|
3.2
|
54.1
|
1.0
|
CHB
|
S:BCL1704
|
3.4
|
42.8
|
1.0
|
CHC
|
S:BCL1704
|
3.4
|
37.2
|
1.0
|
CHA
|
S:BCL1704
|
3.5
|
55.3
|
1.0
|
CHD
|
S:BCL1704
|
3.5
|
48.1
|
1.0
|
N
|
S:GLY10
|
3.7
|
60.5
|
1.0
|
CA
|
S:SER9
|
3.7
|
59.5
|
1.0
|
CA
|
S:GLY10
|
3.9
|
61.1
|
1.0
|
CB
|
S:SER9
|
4.1
|
60.2
|
1.0
|
C3D
|
S:BCL1704
|
4.3
|
55.2
|
1.0
|
C2B
|
S:BCL1704
|
4.3
|
38.5
|
1.0
|
C2D
|
S:BCL1704
|
4.3
|
53.0
|
1.0
|
C3B
|
S:BCL1704
|
4.3
|
38.0
|
1.0
|
C2C
|
S:BCL1704
|
4.4
|
39.9
|
1.0
|
C3C
|
S:BCL1704
|
4.5
|
42.8
|
1.0
|
C3A
|
S:BCL1704
|
4.5
|
50.8
|
1.0
|
C2A
|
S:BCL1704
|
4.5
|
55.2
|
1.0
|
OG
|
S:SER9
|
4.8
|
55.6
|
1.0
|
NH1
|
N:ARG30
|
4.8
|
33.4
|
1.0
|
C
|
S:GLY10
|
4.9
|
64.4
|
1.0
|
CD
|
N:ARG30
|
4.9
|
28.8
|
1.0
|
CBD
|
S:BCL1704
|
5.0
|
57.9
|
1.0
|
|
Magnesium binding site 8 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 8 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1705
b:40.8
occ:1.00
|
MG
|
S:BCL1705
|
0.0
|
40.8
|
1.0
|
ND
|
S:BCL1705
|
2.0
|
50.4
|
1.0
|
NB
|
S:BCL1705
|
2.1
|
38.5
|
1.0
|
NC
|
S:BCL1705
|
2.1
|
41.1
|
1.0
|
NA
|
S:BCL1705
|
2.2
|
48.9
|
1.0
|
O
|
S:SER25
|
2.3
|
34.6
|
1.0
|
C
|
S:SER25
|
2.9
|
30.5
|
1.0
|
C4D
|
S:BCL1705
|
3.0
|
52.8
|
1.0
|
C1B
|
S:BCL1705
|
3.1
|
36.0
|
1.0
|
C4B
|
S:BCL1705
|
3.1
|
33.0
|
1.0
|
C1C
|
S:BCL1705
|
3.1
|
35.8
|
1.0
|
C1D
|
S:BCL1705
|
3.1
|
47.9
|
1.0
|
C4A
|
S:BCL1705
|
3.2
|
44.0
|
1.0
|
C4C
|
S:BCL1705
|
3.2
|
41.1
|
1.0
|
C1A
|
S:BCL1705
|
3.2
|
52.8
|
1.0
|
CHB
|
S:BCL1705
|
3.4
|
39.5
|
1.0
|
CHC
|
S:BCL1705
|
3.4
|
31.9
|
1.0
|
CHA
|
S:BCL1705
|
3.5
|
54.0
|
1.0
|
C4
|
S:BCL1705
|
3.5
|
52.7
|
1.0
|
CHD
|
S:BCL1705
|
3.5
|
43.0
|
1.0
|
CA
|
S:SER25
|
3.6
|
29.7
|
1.0
|
N
|
S:GLY26
|
3.7
|
33.1
|
1.0
|
CB
|
S:SER25
|
3.9
|
31.1
|
1.0
|
CA
|
S:GLY26
|
4.0
|
31.1
|
1.0
|
C3D
|
S:BCL1705
|
4.2
|
53.5
|
1.0
|
C2B
|
S:BCL1705
|
4.3
|
31.6
|
1.0
|
C2D
|
S:BCL1705
|
4.3
|
50.8
|
1.0
|
C3B
|
S:BCL1705
|
4.3
|
31.1
|
1.0
|
C2C
|
S:BCL1705
|
4.4
|
35.1
|
1.0
|
C3C
|
S:BCL1705
|
4.5
|
37.7
|
1.0
|
C3A
|
S:BCL1705
|
4.5
|
48.8
|
1.0
|
O2A
|
S:BCL1705
|
4.5
|
63.2
|
1.0
|
C2A
|
S:BCL1705
|
4.5
|
52.2
|
1.0
|
OG
|
S:SER25
|
4.6
|
30.6
|
1.0
|
NH1
|
P:ARG30
|
4.9
|
31.5
|
1.0
|
CD
|
P:ARG30
|
4.9
|
23.6
|
1.0
|
C3
|
S:BCL1705
|
4.9
|
66.5
|
1.0
|
C
|
S:GLY26
|
4.9
|
31.7
|
1.0
|
CBD
|
S:BCL1705
|
5.0
|
55.7
|
1.0
|
N
|
S:SER25
|
5.0
|
33.0
|
1.0
|
|
Magnesium binding site 9 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 9 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg1706
b:37.1
occ:1.00
|
MG
|
S:BCL1706
|
0.0
|
37.1
|
1.0
|
ND
|
S:BCL1706
|
2.0
|
41.6
|
1.0
|
NB
|
S:BCL1706
|
2.1
|
30.8
|
1.0
|
NC
|
S:BCL1706
|
2.1
|
34.0
|
1.0
|
NA
|
S:BCL1706
|
2.2
|
39.4
|
1.0
|
O
|
S:SER41
|
2.3
|
29.1
|
1.0
|
C
|
S:SER41
|
2.9
|
22.9
|
1.0
|
C4D
|
S:BCL1706
|
3.0
|
43.6
|
1.0
|
C1B
|
S:BCL1706
|
3.1
|
29.4
|
1.0
|
C4B
|
S:BCL1706
|
3.1
|
27.0
|
1.0
|
C1C
|
S:BCL1706
|
3.1
|
29.8
|
1.0
|
C1D
|
S:BCL1706
|
3.1
|
41.3
|
1.0
|
C4A
|
S:BCL1706
|
3.1
|
36.3
|
1.0
|
C4C
|
S:BCL1706
|
3.2
|
35.0
|
1.0
|
C1A
|
S:BCL1706
|
3.2
|
42.0
|
1.0
|
CHB
|
S:BCL1706
|
3.4
|
32.8
|
1.0
|
CHC
|
S:BCL1706
|
3.4
|
27.2
|
1.0
|
CHD
|
S:BCL1706
|
3.5
|
38.7
|
1.0
|
CHA
|
S:BCL1706
|
3.5
|
43.4
|
1.0
|
CA
|
S:SER41
|
3.5
|
21.1
|
1.0
|
N
|
S:GLY42
|
3.7
|
24.8
|
1.0
|
CB
|
S:SER41
|
3.8
|
23.1
|
1.0
|
CA
|
S:GLY42
|
4.1
|
21.5
|
1.0
|
C3D
|
S:BCL1706
|
4.2
|
43.9
|
1.0
|
C2B
|
S:BCL1706
|
4.3
|
27.1
|
1.0
|
C2D
|
S:BCL1706
|
4.3
|
42.8
|
1.0
|
C3B
|
S:BCL1706
|
4.3
|
26.1
|
1.0
|
C2C
|
S:BCL1706
|
4.4
|
29.3
|
1.0
|
C3A
|
S:BCL1706
|
4.5
|
38.4
|
1.0
|
C3C
|
S:BCL1706
|
4.5
|
32.8
|
1.0
|
C2A
|
S:BCL1706
|
4.5
|
42.0
|
1.0
|
OG
|
S:SER41
|
4.6
|
29.7
|
1.0
|
CD
|
R:ARG30
|
4.8
|
21.7
|
1.0
|
NH1
|
R:ARG30
|
4.8
|
24.7
|
1.0
|
N
|
S:SER41
|
4.9
|
27.8
|
1.0
|
C
|
S:GLY42
|
4.9
|
24.2
|
1.0
|
CBD
|
S:BCL1706
|
5.0
|
45.0
|
1.0
|
C4
|
S:BCL1706
|
5.0
|
52.8
|
1.0
|
|
Magnesium binding site 10 out
of 33 in 7ze3
Go back to
Magnesium Binding Sites List in 7ze3
Magnesium binding site 10 out
of 33 in the Pucd-LH2 Complex From Rps. Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Pucd-LH2 Complex From Rps. Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg101
b:13.1
occ:1.00
|
MG
|
C:BCL101
|
0.0
|
13.1
|
1.0
|
NE2
|
C:HIS31
|
1.9
|
11.5
|
1.0
|
ND
|
C:BCL101
|
2.0
|
12.0
|
1.0
|
NB
|
C:BCL101
|
2.1
|
12.9
|
1.0
|
NC
|
C:BCL101
|
2.1
|
12.3
|
1.0
|
NA
|
C:BCL101
|
2.2
|
11.8
|
1.0
|
CD2
|
C:HIS31
|
2.8
|
11.0
|
1.0
|
CE1
|
C:HIS31
|
3.0
|
11.4
|
1.0
|
C4D
|
C:BCL101
|
3.0
|
11.8
|
1.0
|
C4B
|
C:BCL101
|
3.1
|
12.7
|
1.0
|
C1B
|
C:BCL101
|
3.1
|
12.8
|
1.0
|
C1C
|
C:BCL101
|
3.1
|
12.5
|
1.0
|
C4A
|
C:BCL101
|
3.2
|
12.0
|
1.0
|
C1D
|
C:BCL101
|
3.2
|
11.9
|
1.0
|
C4C
|
C:BCL101
|
3.2
|
12.1
|
1.0
|
C1A
|
C:BCL101
|
3.2
|
12.0
|
1.0
|
CHC
|
C:BCL101
|
3.4
|
12.3
|
1.0
|
CHB
|
C:BCL101
|
3.4
|
12.4
|
1.0
|
CHA
|
C:BCL101
|
3.4
|
12.0
|
1.0
|
CHD
|
C:BCL101
|
3.5
|
12.3
|
1.0
|
CG
|
C:HIS31
|
4.0
|
11.5
|
1.0
|
ND1
|
C:HIS31
|
4.0
|
11.4
|
1.0
|
C3D
|
C:BCL101
|
4.2
|
11.7
|
1.0
|
C2B
|
C:BCL101
|
4.3
|
12.8
|
1.0
|
C3B
|
C:BCL101
|
4.3
|
13.0
|
1.0
|
C2D
|
C:BCL101
|
4.3
|
11.4
|
1.0
|
C2C
|
C:BCL101
|
4.4
|
12.6
|
1.0
|
C3C
|
C:BCL101
|
4.5
|
11.7
|
1.0
|
C3A
|
C:BCL101
|
4.5
|
11.8
|
1.0
|
C2A
|
C:BCL101
|
4.5
|
11.8
|
1.0
|
CMD
|
D:BCL101
|
4.6
|
13.4
|
1.0
|
CBD
|
C:BCL101
|
4.9
|
11.8
|
1.0
|
CBC
|
C:BCL101
|
4.9
|
13.1
|
1.0
|
|
Reference:
P.Qian,
C.T.Nguyen-Phan,
A.T.Gardiner,
T.I.Croll,
A.W.Roszak,
J.Southall,
P.J.Jackson,
C.Vasilev,
P.Castro-Hartmann,
K.Sader,
C.N.Hunter,
R.J.Cogdell.
Cryo-Em Structures of Light-Harvesting 2 Complexes From Rhodopseudomonas Palustris Reveal the Molecular Origin of Absorption Tuning. Proc.Natl.Acad.Sci.Usa V. 119 09119 2022.
ISSN: ESSN 1091-6490
PubMed: 36251992
DOI: 10.1073/PNAS.2210109119
Page generated: Thu Oct 3 16:44:05 2024
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