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Magnesium in PDB 7zel: Human SLFN11 Dimer Apoenzyme

Other elements in 7zel:

The structure of Human SLFN11 Dimer Apoenzyme also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human SLFN11 Dimer Apoenzyme (pdb code 7zel). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human SLFN11 Dimer Apoenzyme, PDB code: 7zel:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7zel

Go back to Magnesium Binding Sites List in 7zel
Magnesium binding site 1 out of 2 in the Human SLFN11 Dimer Apoenzyme


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human SLFN11 Dimer Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:38.8
occ:1.00
OE2 A:GLU214 2.3 31.3 1.0
OE1 A:GLU209 2.7 33.2 1.0
OE2 A:GLU209 2.9 33.2 1.0
CD A:GLU209 3.2 33.2 1.0
CD A:GLU214 3.3 31.3 1.0
OD2 A:ASP252 3.3 56.5 1.0
OE1 A:GLU214 3.5 31.3 1.0
O A:PHE215 4.1 35.9 1.0
NZ A:LYS216 4.3 44.8 1.0
CG A:ASP252 4.5 56.5 1.0
CE A:LYS216 4.6 44.8 1.0
CG A:GLU214 4.6 31.3 1.0
CG A:GLU209 4.7 33.2 1.0
O A:THR138 4.7 23.4 1.0

Magnesium binding site 2 out of 2 in 7zel

Go back to Magnesium Binding Sites List in 7zel
Magnesium binding site 2 out of 2 in the Human SLFN11 Dimer Apoenzyme


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human SLFN11 Dimer Apoenzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1002

b:39.5
occ:1.00
OE2 B:GLU214 2.1 30.4 1.0
OE1 B:GLU209 2.7 33.0 1.0
OE2 B:GLU209 2.8 33.0 1.0
CD B:GLU214 2.9 30.4 1.0
CD B:GLU209 3.1 33.0 1.0
OE1 B:GLU214 3.1 30.4 1.0
O B:PHE215 4.1 35.4 1.0
CG B:GLU214 4.3 30.4 1.0
NZ B:LYS216 4.5 43.8 1.0
OD2 B:ASP252 4.5 54.9 1.0
CE B:LYS216 4.6 43.8 1.0
CG B:GLU209 4.6 33.0 1.0
O B:THR138 4.7 21.8 1.0
CG B:ASP252 4.8 54.9 1.0
OH B:TYR234 4.8 29.8 1.0
N B:PHE215 4.8 35.4 1.0
OD1 B:ASP252 4.9 54.9 1.0

Reference:

F.J.Metzner, S.J.Wenzl, M.Kugler, S.Krebs, K.P.Hopfner, K.Lammens. Mechanistic Understanding of Human SLFN11. Nat Commun V. 13 5464 2022.
ISSN: ESSN 2041-1723
PubMed: 36115853
DOI: 10.1038/S41467-022-33123-0
Page generated: Thu Oct 3 16:45:15 2024

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