Magnesium in PDB 8a4a: Structure of Human REP15 in Complex with Bovine RAB3C.

The structure of Structure of Human REP15 in Complex with Bovine RAB3C., PDB code: 8a4a was solved by A.Rai, I.R.Vetter, R.S.Goody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.97 / 2.52
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	58.29, 108.795, 172.027, 90, 90, 90
R / Rfree (%)	20.7 / 25.4

The binding sites of Magnesium atom in the Structure of Human REP15 in Complex with Bovine RAB3C. (pdb code 8a4a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Human REP15 in Complex with Bovine RAB3C., PDB code: 8a4a:

Magnesium binding site 1 out of 1 in the Structure of Human REP15 in Complex with Bovine RAB3C.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Human REP15 in Complex with Bovine RAB3C. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:51.7 occ:1.00 O1G B:GNP301 1.8 52.7 1.0 O B:HOH404 2.0 47.6 1.0 O B:HOH411 2.0 53.2 1.0 O2B B:GNP301 2.2 50.5 1.0 OG1 B:THR62 2.2 51.6 1.0 OG1 B:THR44 2.3 51.9 1.0 CB B:THR62 3.1 54.8 1.0 PG B:GNP301 3.1 67.0 1.0 PB B:GNP301 3.4 51.4 1.0 CB B:THR44 3.4 46.7 1.0 N3B B:GNP301 3.5 55.3 1.0 N B:THR62 3.5 58.5 1.0 O2G B:GNP301 3.8 51.9 1.0 CA B:THR62 3.9 52.4 1.0 OD2 B:ASP85 4.0 60.5 1.0 N B:THR44 4.1 44.2 1.0 O2A B:GNP301 4.1 49.5 1.0 O B:HOH401 4.2 56.8 1.0 OD1 B:ASP85 4.2 57.8 1.0 O3G B:GNP301 4.2 53.7 1.0 O1B B:GNP301 4.3 52.6 1.0 CG2 B:THR62 4.3 48.4 1.0 CA B:THR44 4.3 48.7 1.0 CG2 B:THR44 4.4 39.5 1.0 O B:VAL60 4.5 67.2 1.0 C B:SER61 4.5 61.6 1.0 CG B:ASP85 4.5 62.5 1.0 O3A B:GNP301 4.5 57.7 1.0 O B:THR86 4.6 51.1 1.0 PA B:GNP301 4.7 43.6 1.0 CA B:SER61 4.8 64.1 1.0 O1A B:GNP301 4.9 44.7 1.0

A.Rai, A.K.Singh, N.Bleimling, G.Posern, I.R.Vetter, R.S.Goody. REP15 Interacts with Several Rab Gtpases and Has A Distinct Fold For A Rab Effector. Nat Commun V. 13 4262 2022.
ISSN: ESSN 2041-1723
PubMed: 35871249
DOI: 10.1038/S41467-022-31831-1